CompClust Datasets

CompClust Datasets contain vectors of data, which can be loaded into CompClustTk through a simple tab delimited text format.

Take microarray data for example. If you've done an experiment with four time points; hours 1, 2, 4, and 8. The columns of your data set are the time points and the rows are the individual genes (see below).

# Hour 1 Hour 2 Hour 4 Hour 8
0.72 0.56 0.32 0.06
0.01 0.15 0.80 0.73
0.97 0.95 0.91 0.94

Loading the above data set into CompClustTk and then running a Trajectory Summary plot (see section 3.5.2), you would see that the first gene's trajectory (vector) starts high and gets lower of the four time points. Formatting your data into a tab delimited formated similar to the one shown above will allow you to load your own data sets into CompClustTk.

Brandon King 2005-05-27