The first clustering program we will use is DiagEM.
We will use most of the default parameters, but we will change the
number of clusters we would like DiagEM to create. Change K from two
(default) to five as we will compare our results to the Cho
Classification, which has been partitioned into five clusters which
represent five stages of the yeast cell cycle.
Choose 'DiagEM' from the 'Clustering' menu and then change K from 2 to
5 as shown below.
Figure:
Clustering|DiagEM
|
When clustering is finished you should see a dialog box pop up similar
to the one below.
Figure:
Clustering|DiagEM
|
Brandon King
2004-05-13