# -*- Mode: Shell-Script -*- Not really, but shows comments correctly #*************************************************************************** # # Configuration file for ipython -- ipythonrc format # # A nice setup for using the MLS systems. # #*************************************************************************** # If this file is found in the executing directory or in the user's home # directory as .ipythonrc-physics, it can be loaded by calling # ipython -profile physics # or just # ipython -p physics # include lower layer file and then add physics things include ipythonrc ipythonrc-numsci # import ... # # Here I include pretty much everything under the sun.. I like to # have everything at my finger tips. # # from ... import * import_all # from ... import ... # these are all non-local but usual packages. import_some __future__ nested_scopes import_some MLab mean, median, std, svd, rand, dot, sum import_some MLab cumsum, transpose, diag, ceil, floor, msort, zeros, log,sqrt import_some Numeric array, arange, ravel import_some Scientific.IO ArrayIO import_some Scientific.Statistics Histogram as sciHistogram import_some Scientific.Functions LeastSquares # Now to load the local packages. import_some compClust IPlot mport_some compClust.IPlot plot import_some compClust.mlx datasets import_some compClust.mlx labelings import_some compClust.mlx views import_some compClust.mlx models import_some compClust score import_some compClust.mlx wrapper import_some compClust.util WrapperUtil import_some compClust.util TimeStampedPrintStream import_some compClust.util unique import_some compClust.util InterpreterTools import_some compClust.util.InterpreterTools cluster import_some compClust.util.InterpreterTools clusterSizes import_some compClust.util DistanceMetrics import_some compClust.visualize.plot colorMap import_some compClust.util SortingTools import_some compClust.util SetOps import_some compClust.util listOps import_some compClust.util Histogram import_some compClust.util PickleLambda # now to load some of the bioinformatics tools import_mod compClust