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Methods
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__init__
agglomerate
copy
create_clustering_command_line
create_clustering_input_file
getLabeling
getModel
run
validate
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__init__
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__init__ (
self,
dataset=None,
parameters=None,
)
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agglomerate
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agglomerate (
self,
outputFilename,
CDTFilename,
GTRFilename,
)
agglomerate(outputFilename, CDTFilename. GTRFilename)
Agglomerated over the specified GTR file and writes the output to
outputFilename. The CDT file is used for labels only.
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copy
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copy ( self )
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create_clustering_command_line
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create_clustering_command_line ( self )
command_line = create_clustering_command_line()
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create_clustering_input_file
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create_clustering_input_file ( self )
create_clustering_input_file()
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getLabeling
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getLabeling ( self )
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getModel
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getModel ( self )
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run
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run ( self )
run()
Prepares the inputs to the clustering algorithm (XClust) and runs it.
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validate
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validate ( self )
validate()
Ensures that all parameters and environment variables nescessary
to run the clustering algorithm (XClust) are defined.
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