080920_HWI-EAS229_0057_30GBJAAXX Summary

Summary Information For Experiment 080920_HWI-EAS229_0057_30GBJAAXX on Machine unknown



Chip Summary

MachineUNKNOWN
Run Folder080920_HWI-EAS229_0057_30GBJAAXX
Chip IDunknown



Chip Results Summary

Clusters Clusters (PF) Yield (kbases)
126151880 95923456 3549167



Lane Parameter Summary

Lane Sample ID Sample Target Sample Type Length Filter Num Tiles Tiles
1 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 1
2 unknown hg18 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 2
3 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 3
4 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 4
5 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 5
6 unknown hg18 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 6
7 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 7
8 unknown mm9 ELAND_PAIR 37, 37 '((CHASTITY>=0.6))' 100 Lane 8



Lane Results Summary : Read 1

Lane Info Tile Mean +/- SD for Lane
Lane Lane Yield (kbases) Clusters (raw) Clusters (PF) 1st Cycle Int (PF) % intensity after 20 cycles (PF) % PF Clusters % Align (PF) Alignment Score (PF) % Error Rate (PF)
1 277083 103646 +/- 4515 74887 +/- 6080 290 +/- 17 99.34 +/- 3.52 72.22 +/- 4.63 89.19 +/- 0.59 14.16 +/- 0.63 0.94 +/- 0.17
2 289563 106678 +/- 4652 78260 +/- 2539 294 +/- 16 98.23 +/- 2.66 73.43 +/- 2.52 87.05 +/- 0.64 16.81 +/- 0.55 0.92 +/- 0.17
3 259242 84583 +/- 5963 70065 +/- 4194 284 +/- 18 99.82 +/- 3.05 82.90 +/- 1.32 89.49 +/- 0.20 18.13 +/- 0.66 0.81 +/- 0.13
4 210549 68813 +/- 4782 56905 +/- 4145 300 +/- 29 102.00 +/- 14.74 82.91 +/- 5.89 56.93 +/- 0.82 25.85 +/- 2.30 0.95 +/- 0.30
5 295555 104854 +/- 4664 79879 +/- 6270 281 +/- 19 98.26 +/- 5.85 76.34 +/- 6.67 57.71 +/- 0.30 26.16 +/- 1.68 0.97 +/- 0.19
6 140401 43555 +/- 1632 37946 +/- 2140 233 +/- 16 105.74 +/- 8.40 87.14 +/- 3.87 89.08 +/- 1.00 33.53 +/- 2.18 1.05 +/- 0.21
7 154217 54265 +/- 1588 41680 +/- 5319 224 +/- 18 111.33 +/- 8.90 76.94 +/- 10.52 84.50 +/- 1.41 27.44 +/- 2.33 1.32 +/- 0.25
8 147969 64363 +/- 2697 39991 +/- 6785 248 +/- 43 109.93 +/- 7.80 62.45 +/- 12.05 82.20 +/- 2.08 24.63 +/- 2.53 1.57 +/- 0.22
Tile mean across chip
Av. 78844 59952 269 103.08 76.79 79.52 23.34 1.06



Lane Results Summary : Read 2

Lane Info Tile Mean +/- SD for Lane
Lane Lane Yield (kbases) Clusters (raw) Clusters (PF) 1st Cycle Int (PF) % intensity after 20 cycles (PF) % PF Clusters % Align (PF) Alignment Score (PF) % Error Rate (PF)
1 277083 103647 +/- 4516 74887 +/- 6080 277 +/- 17 94.42 +/- 5.68 72.22 +/- 4.63 81.54 +/- 2.13 42.70 +/- 5.49 0.89 +/- 0.27
2 289563 106679 +/- 4653 78260 +/- 2539 259 +/- 13 93.57 +/- 2.55 73.43 +/- 2.52 82.05 +/- 0.37 43.98 +/- 3.02 0.76 +/- 0.15
3 259242 84584 +/- 5964 70065 +/- 4194 252 +/- 12 94.23 +/- 2.19 82.90 +/- 1.32 84.94 +/- 0.28 51.76 +/- 2.29 0.59 +/- 0.07
4 210549 68814 +/- 4783 56905 +/- 4145 226 +/- 16 96.82 +/- 7.12 82.91 +/- 5.89 56.01 +/- 0.99 27.86 +/- 3.48 0.95 +/- 0.33
5 295555 104855 +/- 4665 79879 +/- 6270 200 +/- 24 103.56 +/- 15.45 76.34 +/- 6.67 56.76 +/- 0.41 25.68 +/- 2.06 0.98 +/- 0.17
6 140401 43556 +/- 1633 37946 +/- 2140 179 +/- 10 100.82 +/- 5.47 87.14 +/- 3.87 88.64 +/- 1.42 34.05 +/- 2.60 0.98 +/- 0.22
7 154217 54266 +/- 1589 41680 +/- 5319 184 +/- 5 103.42 +/- 3.47 76.94 +/- 10.52 83.90 +/- 1.32 27.60 +/- 2.07 1.26 +/- 0.16
8 147969 64364 +/- 2698 39991 +/- 6785 206 +/- 31 99.48 +/- 3.23 62.45 +/- 12.05 79.81 +/- 3.35 23.06 +/- 2.50 1.56 +/- 0.23
Tile mean across chip
Av. 78844 59952 223 98.29 76.79 76.70 34.59 1.00



Expanded Lane Summary : Read 1

Lane Info Phasing Info Raw Data (tile mean) Filtered Data (tile mean)
Lane Clusters (tile mean) (raw) % Phasing % Prephasing % Error Rate (raw) Equiv Perfect Clusters (raw) % retained Cycle 2-4 Av Int (PF) Cycle 2-10 Av % Loss (PF) Cycle 10-20 Av % Loss (PF) % Align (PF) % Error Rate (PF) Equiv Perfect Clusters (PF)
1 103646 0.8600 0.4900 1.37 74813 72.22 266 +/- 17 -0.53 +/- 0.37 -0.42 +/- 0.21 89.19 0.94 64718
2 106678 0.8600 0.4900 1.34 74842 73.43 284 +/- 16 0.08 +/- 0.43 -0.17 +/- 0.34 87.05 0.92 65850
3 84583 0.8600 0.4900 1.09 65493 82.90 286 +/- 14 0.29 +/- 0.48 -0.02 +/- 0.17 89.49 0.81 60899
4 68813 0.8600 0.4900 1.19 33697 82.91 286 +/- 23 -0.01 +/- 0.62 -0.37 +/- 0.30 56.93 0.95 31080
5 104854 0.8600 0.4900 1.32 50075 76.34 258 +/- 25 -0.03 +/- 0.46 -0.49 +/- 0.27 57.71 0.97 44149
6 43555 0.8600 0.4900 1.24 34399 87.14 231 +/- 14 -0.19 +/- 0.46 -0.34 +/- 0.40 89.08 1.05 32302
7 54265 0.8600 0.4900 1.67 38188 76.94 224 +/- 14 -0.41 +/- 0.49 -0.55 +/- 0.23 84.50 1.32 33435
8 64363 0.8600 0.4900 2.15 38077 62.45 247 +/- 42 -0.52 +/- 0.36 -0.29 +/- 0.19 82.20 1.57 31036



Expanded Lane Summary : Read 2

Lane Info Phasing Info Raw Data (tile mean) Filtered Data (tile mean)
Lane Clusters (tile mean) (raw) % Phasing % Prephasing % Error Rate (raw) Equiv Perfect Clusters (raw) % retained Cycle 2-4 Av Int (PF) Cycle 2-10 Av % Loss (PF) Cycle 10-20 Av % Loss (PF) % Align (PF) % Error Rate (PF) Equiv Perfect Clusters (PF)
1 103646 0.7900 0.4600 1.24 68870 72.22 254 +/- 15 -0.53 +/- 0.37 -0.42 +/- 0.21 81.54 0.89 59272
2 106678 0.7900 0.4600 1.11 71980 73.43 247 +/- 12 0.08 +/- 0.43 -0.17 +/- 0.34 82.05 0.76 62240
3 84583 0.7900 0.4600 0.80 63500 82.90 243 +/- 8 0.29 +/- 0.48 -0.02 +/- 0.17 84.94 0.59 58029
4 68813 0.7900 0.4600 1.12 33534 82.91 210 +/- 19 -0.01 +/- 0.62 -0.37 +/- 0.30 56.01 0.95 30548
5 104854 0.7900 0.4600 1.24 49951 76.34 193 +/- 12 -0.03 +/- 0.46 -0.49 +/- 0.27 56.76 0.98 43366
6 43555 0.7900 0.4600 1.12 34751 87.14 174 +/- 7 -0.19 +/- 0.46 -0.34 +/- 0.40 88.64 0.98 32208
7 54265 0.7900 0.4600 1.55 38418 76.94 178 +/- 4 -0.41 +/- 0.49 -0.55 +/- 0.23 83.90 1.26 33240
8 64363 0.7900 0.4600 2.07 36968 62.45 198 +/- 32 -0.52 +/- 0.36 -0.29 +/- 0.19 79.81 1.56 30181