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Convert to unittest2
[htsworkflow.git]
/
test
/
test_srf2fastq.py
diff --git
a/test/test_srf2fastq.py
b/test/test_srf2fastq.py
index 74e031ca7324174362de8695fb99ba4c50d830c7..9185fffde9d516d8651a5ade40723645ab82fa26 100644
(file)
--- a/
test/test_srf2fastq.py
+++ b/
test/test_srf2fastq.py
@@
-1,7
+1,7
@@
import os
from StringIO import StringIO
import sys
import os
from StringIO import StringIO
import sys
-import unittest
+from unittest2 import TestCase
_module_path, _module_name = os.path.split(__file__)
sys.path.append(os.path.join(_module_path, '..', 'scripts'))
_module_path, _module_name = os.path.split(__file__)
sys.path.append(os.path.join(_module_path, '..', 'scripts'))
@@
-10,7
+10,7
@@
from htsworkflow.pipelines.test.simulate_runfolder import TESTDATA_DIR
from htsworkflow.pipelines import srf2fastq
from htsworkflow.pipelines import srf2fastq
-class testSrf2Fastq(
unittest.
TestCase):
+class testSrf2Fastq(TestCase):
def test_split_good(self):
source = StringIO("""@header
AGCTTTTT
def test_split_good(self):
source = StringIO("""@header
AGCTTTTT
@@
-135,8
+135,14
@@
IIIIB+++
self.failUnlessEqual(is_cnf1(cnf4_path), False)
self.failUnlessEqual(is_cnf1(cnf1_path), True)
self.failUnlessEqual(is_cnf1(cnf4_path), False)
self.failUnlessEqual(is_cnf1(cnf1_path), True)
+
def suite():
def suite():
- return unittest.makeSuite(testSrf2Fastq,'test')
+ from unittest2 import TestSuite, defaultTestLoader
+ suite = TestSuite()
+ suite.addTests(defaultTestLoader.loadTestsFromTestCase(testSrf2Fastq))
+ return suite
+
if __name__ == "__main__":
if __name__ == "__main__":
- unittest.main(defaultTest="suite")
+ from unittest2 import main
+ main(defaultTest="suite")