+from django.conf import settings
from django.http import HttpResponse
from django.shortcuts import render_to_response
from django.core.exceptions import ObjectDoesNotExist
from htsworkflow.frontend.eland_config import forms
-from htsworkflow.frontend import settings
from htsworkflow.frontend.experiments import models
import os
#Convert all newline conventions to unix style
for lane in fcObj.lane_set.all():
- data.append("# Lane%d: %d | %s" % \
- (lane.lane_number, lane.library_id, lane.library.library_name.replace('%', '%%')))
+ data.append("# Lane%d: %s | %s" % \
+ (lane.lane_number, str(lane.library.id), lane.library.library_name.replace('%', '%%')))
#data.append("GENOME_DIR %s" % (BASE_DIR))
#data.append("CONTAM_DIR %s" % (BASE_DIR))
#l1s = form['lane1_species']
for lane in fcObj.lane_set.all():
species = lane.library.library_species.scientific_name
- genome_dict.setdefault(species, []).append(unicode(lane.lane_number))
+ genome_dict.setdefault(species, []).append(str(lane.lane_number))
- genome_list = genome_dict.keys()
+ genome_list = list(genome_dict.keys())
genome_list.sort()
#Loop through and create entries for each species.