X-Git-Url: http://woldlab.caltech.edu/gitweb/?a=blobdiff_plain;f=alg%2FCMakeLists.txt;h=83315dca6333bf4438a4e672f2e7b5d2ca1cb517;hb=97498410e1fc5c39eac0282a6620b8fcb0f02ff3;hp=0a7e8e7773523286368f9ab586c687cb4fb7602f;hpb=7d4fbcb6060a60a8ea25ca1303fcaaaf8574f24a;p=mussa.git

diff --git a/alg/CMakeLists.txt b/alg/CMakeLists.txt
index 0a7e8e7..83315dc 100644
--- a/alg/CMakeLists.txt
+++ b/alg/CMakeLists.txt
@@ -1,5 +1,10 @@
 FIND_PACKAGE(OpenGL )
-FIND_PACKAGE(Boost REQUIRED)
+
+set(Boost_USE_STATIC_LIBS   OFF)
+set(Boost_USE_MULTITHREADED ON)
+FIND_PACKAGE(Boost 1.34.1 REQUIRED filesystem unit_test_framework
+                                                               serialization system program_options )
+FIND_PACKAGE(Boost 1.3.4.1 COMPONENTS python )
 FIND_PACKAGE(Qt4)
 INCLUDE( ${QT_USE_FILE} )
 INCLUDE( Platform )
@@ -11,6 +16,7 @@ SET(MOC_HEADERS
 QT4_WRAP_CPP(MOC_SOURCES ${MOC_HEADERS})
 
 SET(SOURCES alphabet.cpp
+            annotations.cpp
             annotation_colors.cpp 
             color.cpp 
             conserved_path.cpp 
@@ -18,12 +24,14 @@ SET(SOURCES alphabet.cpp
             flp_seqcomp.cpp 
             glseqbrowser.cpp 
             glsequence.cpp 
+            io.cpp
             mussa.cpp 
             motif_parser.cpp 
             nway_entropy.cpp
             nway_other.cpp 
             nway_paths.cpp
             parse_options.cpp 
+            seq.cpp
             seq_span.cpp
             sequence.cpp
             sequence_location.cpp )
@@ -38,7 +46,7 @@ SET_SOURCE_FILES_PROPERTIES(
 
 ADD_LIBRARY( mussa_core STATIC ${SOURCES} ${MOC_SOURCES})
 INCLUDE_DIRECTORIES(${OPENGL_INCLUDE_DIR}
-                    ${BOOST_INCLUDE_DIR}
+                    ${Boost_INCLUDE_DIR}
                     ${QT_INCLUDES}
                     ${CMAKE_CURRENT_SOURCE_DIR})