X-Git-Url: http://woldlab.caltech.edu/gitweb/?a=blobdiff_plain;f=extra%2Fucsc_encode_submission%2Fucsc_gather.py;fp=extra%2Fucsc_encode_submission%2Fucsc_gather.py;h=72d7f325e64b9d91966cf603dbd1a7236d683add;hb=6d1e134c0f3755940189bbd1ed3f00957370479a;hp=37ef73193f0ae98f680b9dfba6e3463b029a8feb;hpb=d3df04a113560be06ad863117c29f0a00783ff19;p=htsworkflow.git

diff --git a/extra/ucsc_encode_submission/ucsc_gather.py b/extra/ucsc_encode_submission/ucsc_gather.py
index 37ef731..72d7f32 100755
--- a/extra/ucsc_encode_submission/ucsc_gather.py
+++ b/extra/ucsc_encode_submission/ucsc_gather.py
@@ -596,6 +596,7 @@ class NameToViewMap(object):
             ('*.bai',                   None),
             ('*.bam',                   self._guess_bam_view),
             ('*.splices.bam',           'Splices'),
+            ('junctions.bed',           'Junctions'),
             ('*.jnct',                  'Junctions'),
             ('*.plus.bigwig',           'PlusSignal'),
             ('*.minus.bigwig',          'MinusSignal'),