X-Git-Url: http://woldlab.caltech.edu/gitweb/?a=blobdiff_plain;f=htsworkflow%2Fpipelines%2Ftest%2Ftest_genome_mapper.py;h=e7561adf567b124ea6b06702934335d60337752f;hb=refs%2Fheads%2Fpython3-django1.5;hp=1101305effd80ede9a09d4db99abe3566b31c8ca;hpb=4262586d10cc0cc227390873b301b55244204c11;p=htsworkflow.git diff --git a/htsworkflow/pipelines/test/test_genome_mapper.py b/htsworkflow/pipelines/test/test_genome_mapper.py index 1101305..e7561ad 100644 --- a/htsworkflow/pipelines/test/test_genome_mapper.py +++ b/htsworkflow/pipelines/test/test_genome_mapper.py @@ -1,6 +1,6 @@ -from unittest2 import TestCase +from unittest import TestCase -from StringIO import StringIO +from io import StringIO from htsworkflow.pipelines import genome_mapper class testGenomeMapper(TestCase): @@ -21,18 +21,18 @@ class testGenomeMapper(TestCase): self.failUnlessEqual("%(Mus musculus|mm8)s" % (genome_map), "/mm8") self.failUnlessEqual("%(Mus musculus|mm10)s" % (genome_map), "/mm10") - self.failUnlessEqual(len(genome_map.keys()), 6) - self.failUnlessEqual(len(genome_map.values()), 6) - self.failUnlessEqual(len(genome_map.items()), 6) + self.failUnlessEqual(len(list(genome_map.keys())), 6) + self.failUnlessEqual(len(list(genome_map.values())), 6) + self.failUnlessEqual(len(list(genome_map.items())), 6) def suite(): - from unittest2 import TestSuite, defaultTestLoader + from unittest import TestSuite, defaultTestLoader suite = TestSuite() suite.addTests(defaultTestLoader.loadTestsFromTestCase(testGenomeMapper)) return suite if __name__ == "__main__": - from unittest2 import main + from unittest import main main(defaultTest="suite")