+from django import newforms as forms
+from django.newforms.util import ErrorList
+
+
+SPECIES_LIST = [#('--choose--', '--Choose--'),
+ ('hg18', 'Homo sapiens (Hg18)'),
+ ('Mm8', 'Mus musculus (Mm8)'),
+ ('arabv6', 'Arabadopsis Thaliana v6'),
+ ('other', 'Other species (Include in description)')]
+
+
+class DivErrorList(ErrorList):
+ def __unicode__(self):
+ return self.as_divs()
+
+ def as_divs(self):
+ if not self: return u''
+ return u'<div class="errorlist">%s</div>' % (''.join([u'<div class="error">%s</div>' % e for e in self]))
+
+
+
+class ConfigForm(forms.Form):
+
+ flow_cell_number = forms.CharField(min_length=2)
+ run_date = forms.DateTimeField()
+ advanced_run = forms.BooleanField(required=False)
+ read_length = forms.IntegerField(min_value=1, initial=32)
+ #eland_repeat = forms.BooleanField()
+
+ #needs a for loop or something to allow for n configurations
+ #analysis_type = forms.ChoiceField(choices=[('eland','eland')])
+ lane1_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane1_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane2_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane2_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane3_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane3_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane4_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane4_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane5_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane5_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane6_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane6_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane7_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane7_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ lane8_species = forms.ChoiceField(choices=SPECIES_LIST)
+ lane8_description = forms.CharField(widget=forms.TextInput(attrs={'size':'60'}))
+
+ notes = forms.CharField(widget=forms.Textarea(attrs={'cols':'70'}), required=False)
+
+ #lane_specific_read_length = forms.IntegerField(min_value=1)
+
+ #eland_genome_lanes = forms.MultipleChoiceField(choices=[('lane1','1'),
+ # ('lane2','2'),
+ # ('lane3','3'),
+ # ('lane4','4'),
+ # ('lane5','5'),
+ # ('lane6','6'),
+ # ('lane7','7'),
+ # ('lane8','8') ])
+
+ #eland_genome = forms.ChoiceField(choices=)
+
+ #use_bases_lanes = forms.MultipleChoiceField(choices=[('lane1','1'),
+ # ('lane2','2'),
+ # ('lane3','3'),
+ # ('lane4','4'),
+ # ('lane5','5'),
+ # ('lane6','6'),
+ # ('lane7','7'),
+ # ('lane8','8') ])
+
+ #use_bases_mask = forms.CharField()
+
+ #sequence_format = forms.ChoiceField(choices=[('scarf', 'scarf')])
+
+
+
+ #subject = forms.CharField(max_length=100)
+ #message = forms.CharField()
+ #sender = forms.EmailField()
+ #cc_myself = forms.BooleanField()
+
+ def as_custom(self):
+ """
+ Displays customized html output
+ """
+ html = []
+
+ fcn = self['flow_cell_number']
+
+ html.append(fcn.label_tag() + ': ' + str(fcn) + str(fcn.errors) + '<br />')
+
+ run_date = self['run_date']
+ html.append(run_date.label_tag() + ': ' + str(run_date) + str(run_date.errors) + '<br />')
+
+ arun = self['advanced_run']
+ html.append(arun.label_tag() + ': ' + str(arun) + str(arun.errors) + '<br />')
+
+ rl = self['read_length']
+ html.append(rl.label_tag() + ': ' + str(rl) + str(rl.errors) + '<br /><br />')
+
+ html.append('<table border="0">')
+ html.append(' <tr><td>%s</td><td>%s</td><td>%s</td></tr>' \
+ % ('Lane', 'Species', 'Description'))
+
+ l1s = self['lane1_species']
+ l1d = self['lane1_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('1', str(l1s), str(l1s.errors), str(l1d), str(l1d.errors)))
+
+ l2s = self['lane2_species']
+ l2d = self['lane2_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('2', str(l2s), str(l2s.errors), str(l2d), str(l2d.errors)))
+
+ l3s = self['lane3_species']
+ l3d = self['lane3_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('3', str(l3s), str(l3s.errors), str(l3d), str(l3d.errors)))
+
+ l4s = self['lane4_species']
+ l4d = self['lane4_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('4', str(l4s), str(l4s.errors), str(l4d), str(l4d.errors)))
+
+ l5s = self['lane5_species']
+ l5d = self['lane5_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('5', str(l5s), str(l5s.errors), str(l5d), str(l5d.errors)))
+
+ l6s = self['lane6_species']
+ l6d = self['lane6_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('6', str(l6s), str(l6s.errors), str(l6d), str(l6d.errors)))
+
+ l7s = self['lane7_species']
+ l7d = self['lane7_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('7', str(l7s), str(l7s.errors), str(l7d), str(l7d.errors)))
+
+ l8s = self['lane8_species']
+ l8d = self['lane8_description']
+ html.append(' <tr><td>%s</td><td>%s %s</td><td>%s %s</td></tr>' \
+ % ('8', str(l8s), str(l8s.errors), str(l8d), str(l8d.errors)))
+
+ html.append('</table><br />')
+
+ notes = self['notes']
+ html.append('<p>Notes:</p>')
+ html.append(' %s<br />' % (str(notes)))
+
+ return '\n'.join(html)
+
+
+
\ No newline at end of file