From: Diane Trout <diane@caltech.edu>
Date: Thu, 29 Jan 2009 22:29:56 +0000 (+0000)
Subject: Minor tweaks to libray summary page.
X-Git-Tag: 0.1.14~4
X-Git-Url: http://woldlab.caltech.edu/gitweb/?a=commitdiff_plain;h=9b528e659ff15a3285d1a38c11c7e1d0bec912f6;p=htsworkflow.git

Minor tweaks to libray summary page.

Move the totals to after the 0,1,2-mismatch collumn.
Suppress the None in the headings for the blocks that list what
species/spike in the reads matched against.
Add "lane" and "end" (if needed) to the header for that summary.
---

diff --git a/templates/summary_stats.html b/templates/summary_stats.html
index 89c6faa..2890155 100644
--- a/templates/summary_stats.html
+++ b/templates/summary_stats.html
@@ -45,7 +45,6 @@
     <td>%</td>
     <td>total</td>
     <td>%</td>
-    <td>Total</td>
     <td>0 mismatch</td>
     <td>1 mismatch</td>
     <td>2 mismatch</td>
@@ -53,6 +52,7 @@
     <td>0 mismatch</td>
     <td>1 mismatch</td>
     <td>2 mismatch</td>
+    <td>Total</td>
     </tr>
   </thead>
   <tbody>
@@ -69,14 +69,14 @@
       <td>{{ lane.no_match_percent|stringformat:".2f" }}</td>
       <td>{{ lane.qc_failed }}</td>
       <td>{{ lane.qc_failed_percent|stringformat:".2f" }}</td>
-      <td>{{ lane.unique_reads }}</td>
       <td>{{ lane.match_codes.U0 }}</td>
       <td>{{ lane.match_codes.U1 }}</td>
       <td>{{ lane.match_codes.U2 }}</td>
-      <td>{{ lane.repeat_reads }}</td>
+      <td>{{ lane.unique_reads }}</td>
       <td>{{ lane.match_codes.R0 }}</td>
       <td>{{ lane.match_codes.R1 }}</td>
       <td>{{ lane.match_codes.R2 }}</td>
+      <td>{{ lane.repeat_reads }}</td>
     </tr>
     {% endfor %}
   </tbody>
@@ -84,7 +84,10 @@
 <br/>
 <hr/>
 {% for lane in lane_summary_list %}
-<h2>{{lane.cycle_width}} {{ lane.flowcell_id }} {{ lane.lane_id }} {{ lane.end }}</h2>
+<h2>
+  {{lane.cycle_width}} {{ lane.flowcell_id }} lane {{ lane.lane_id }} 
+  {% if lane.end %} end {{ lane.end }}{% endif %}
+</h2>
   <ul>
     {% for name, counts in lane.summarized_reads.items %}
     <li><b>{{ name }}</b>: {{ counts }}</li>