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Attempt to split common initial data from wold lab specific database contents.
2014-06-23 Diane TroutAttempt to split common initial data from wold lab...
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2014-06-23 Diane TroutRemove very old misplaced initial data fixtures
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2014-06-19 Diane TroutExplicitly list initial_data.json for the test data...
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2014-06-10 Diane TroutAdd post_json as some DCC objects are created with...
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2014-06-10 Diane TroutRename headers to json_headers for requests (seemed...
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2014-06-10 Diane TroutUpdates to jsonld context for the DCC schemas.
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2014-06-10 Diane TroutUpdate test_encoded test cases due to https now being...
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2014-06-10 Diane TroutDCC switched to https
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2014-06-10 Diane TroutUpdate fastqname code & test code to better support...
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2014-06-10 Diane TroutFor some reason the previous integrety fixes, added...
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2014-06-10 Diane TroutPostgresql has referential integrety checking.
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2014-06-10 Diane Troutuse autoopen to access fastq files
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2014-06-10 Diane TroutStart implementing tool to compute library fastq quality
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2014-06-10 Diane TroutJust use the python 2 url parsers instead of trying...
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2014-06-10 Diane TroutUpdate timestamps in inventory app test data to be...
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2014-06-10 Diane Troutpoint default flowcell directory to test data
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2014-06-10 Diane Troutadd default values for some application specific values
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2014-06-10 Diane TroutConfigure default STATICFILES_DIRS for static files...
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2014-06-10 Diane TroutMathematica had a suggestion for a fastq mime type...
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2014-06-10 Diane TroutRegex pattern was wrong.
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2014-06-10 Diane TroutConvert more timestamps to include timezone
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2014-06-10 Diane TroutMerge branch 'master' of mus.cacr.caltech.edu:htsworkflow
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2014-02-18 Diane TroutAdd option to compress fastq file
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2014-02-12 Diane TroutAllow arbitrarily long regexes in experiment.FileType...
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2014-01-17 Diane TroutRemove django test environment setup code.
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2014-01-17 Diane TroutUse SkipIf to skip copier tests if benderjab isn't...
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2014-01-17 Diane TroutConvert timestamps from the runfolder file to a timezone...
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2014-01-17 Diane Troutdjango provides django.utils.timezone.now to return...
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2014-01-17 Diane TroutSet default timezone to where our lab is located
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2014-01-17 Diane TroutUpdate test data dates to have timezone information
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2014-01-17 Diane TroutFix test to use newer django database dictionary instead...
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2014-01-17 Diane TroutRe-add default email addresses for email notification...
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2014-01-17 Diane TroutImplement a encoded search to json-ld wrapper.
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2014-01-17 Diane Troutmake sure @vocab url has a trailing #. Its needed to...
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2014-01-17 Diane TroutUse new context creation functions to attach context...
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2014-01-17 Diane TroutAdd functions to create a json-ld context and add namespaces...
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2014-01-15 Diane TroutUtility class for accessing ENCODE3's submit / data...
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2014-01-15 Diane TroutAdapter to use PyLD's json-ld parser to add triples...
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2014-01-15 Diane Troutremove some trailing whitespace
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2014-01-15 Diane Troutremove some trailing whitespace
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2014-01-15 Diane TroutAdd option to get_model to disable RDF graph context.
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2014-01-08 Diane TroutIgnore kdevelop & kate project files.
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2014-01-08 Diane TroutRename stripNamespace strip_namespace
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2013-12-17 Diane Troutremove some test code debugging print statements
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2013-12-17 Diane TroutInventory works, even though its was hidden between...
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2013-12-17 Diane Troutmove an example result directory into git and use it...
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2013-12-17 Diane TroutMerge branch 'django1.4'
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2013-12-17 Diane TroutUpdate requirements to require diango 1.6
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2013-12-10 Diane TroutUpdate manage script to django 1.6
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2013-12-10 Diane TroutBeing able to filter on paired end runs might be useful
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2013-12-10 Diane Troutremove deprecated module django.contrib.databrowse
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2013-12-10 Diane TroutWith 1.6 boolean field changed to default Null, so...
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2013-12-10 Diane TroutDjango 1.6 is pickier about enforcing referential integrity
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2013-12-10 Diane TroutFix urls patterns import to be compatible with django 1.6
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2013-12-10 Diane TroutMerge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...
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2013-12-06 Diane TroutAfter implementing proper tests get a working implementation...
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2013-12-06 Diane TroutAfter implementing proper tests get a working implementation...
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2013-12-05 Diane TroutMerge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...
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2013-10-21 Diane TroutMerge remote-tracking branch 'brisby/django1.4' into...
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2013-10-21 Diane TroutMerge branch 'django1.4' of mus.cacr.caltech.edu:htsworkflow...
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2013-10-17 Diane TroutMerge branch 'master' into django1.4
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2013-10-17 Diane TroutImplement a wrapper around bigWigInfo to report bigWig...
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2013-09-24 Diane TroutShare more code to generate result tree.
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2013-08-12 Diane TroutUpdate test data for renamed library type.
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2013-08-10 Diane TroutAdd sortOrder and filtering parameters to the trackhub.
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2013-07-22 Diane TroutMove version finding code into the util directory.
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2013-07-22 Diane TroutTest changes to submission code.
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2013-07-22 Diane TroutGenerate manifest.txt files for submitting to ENCODE3.
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2013-07-22 Diane Troutturtle writing improvements.
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2013-07-22 Diane TroutAdd a generator that returns analysis nodes from a...
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2013-07-20 Diane TroutAdd python namespace for encode3 RDF namespace
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2013-07-18 Diane TroutAdd function to list the names for submissions from...
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2013-07-17 Diane TroutAdd function to parse scp / ssh style URLs.
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2013-07-16 Diane TroutDeleting commented out code.
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2013-07-08 Diane TroutUpdate test to work with species -> species_name rename.
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2013-07-01 Diane TroutInitial attempt to start generating trackHubs and manifest...
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2013-07-01 Diane Trouttype checking more detailed than Literal doesn't work...
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2013-06-28 Diane TroutAdd option to copy source files for a submission.
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2013-06-18 Diane TroutFurther improve reliability of make_tree_from.
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2013-06-18 Diane Troutcopy_tree_from wasn't actually making any symlinks.
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2013-06-18 Diane TroutUpdate tests for new version of redland rdf lib.
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2013-06-18 Diane TroutRemove deprecated adminmedia template tag from loader.
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2013-06-18 Diane TroutReplace deprecated django.contrib adminmedia with staticfiles.
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2013-06-18 Diane TroutUse proper User model import.
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htsworkflow sequencing LIMS software