X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=bowtie.git;a=blobdiff_plain;f=debian%2Fcontrol;fp=debian%2Fcontrol;h=1b71f1c495057d2a1bc597ccac787e296cefc942;hp=0000000000000000000000000000000000000000;hb=7ff6d33630733772d810e0ad76ed0a6ff60d612d;hpb=3cce4167a5b99fda4b9b372ee73494ed36dbcd59

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+Source: bowtie
+Section: science
+Priority: extra
+Maintainer:  Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
+DM-Upload-Allowed: yes
+Uploaders: Steffen Moeller <moeller@debian.org>,
+ Yask Gupta <yask.gupta87@gmail.com>,
+ Andreas Tille <tille@debian.org>
+Build-Depends: debhelper (>= 9), help2man
+Standards-Version: 3.9.3
+Homepage: http://bowtie-bio.sourceforge.net/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/bowtie/trunk
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/bowtie/trunk/
+
+Package: bowtie
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Suggests: bowtie-examples
+Description: ultrafast memory-efficient short read aligner
+ This package addresses the problem to interpret the results from the
+ latest (2010) DNA sequencing technologies. Those will yield fairly
+ short stretches and those cannot be interpreted directly. It is the
+ challenge for tools like Bowtie to give a chromosomal location to the
+ short stretches of DNA sequenced per run.
+ .
+ Bowtie aligns short DNA sequences (reads) to the human genome at a rate
+ of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
+ a Burrows-Wheeler index to keep its memory footprint small: typically
+ about 2.2 GB for the human genome (2.9 GB for paired-end).
+
+Package: bowtie-examples
+Architecture: all
+Depends: ${misc:Depends}
+Recommends: bowtie
+Enhances: bowtie
+Description: Examples for bowtie, the ultrafast memory-efficient short read aligner
+ This package addresses the problem to interpret the results from the
+ latest (2010) DNA sequencing technologies. Those will yield fairly
+ short stretches and those cannot be interpreted directly. It is the
+ challenge for tools like Bowtie to give a chromosomal location to the
+ short stretches of DNA sequenced per run.
+ .
+ Bowtie aligns short DNA sequences (reads) to the human genome at a rate
+ of over 25 million 35-bp reads per hour. Bowtie indexes the genome with
+ a Burrows-Wheeler index to keep its memory footprint small: typically
+ about 2.2 GB for the human genome (2.9 GB for paired-end).
+ .
+ This package provides some example data to work with bowtie.