X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=bowtie.git;a=blobdiff_plain;f=debian%2Fget-orig-source;fp=debian%2Fget-orig-source;h=a61aacbcc1268d879f4a120226a1cf6c26b5465b;hp=0000000000000000000000000000000000000000;hb=7ff6d33630733772d810e0ad76ed0a6ff60d612d;hpb=3cce4167a5b99fda4b9b372ee73494ed36dbcd59

diff --git a/debian/get-orig-source b/debian/get-orig-source
new file mode 100644
index 0000000..a61aacb
--- /dev/null
+++ b/debian/get-orig-source
@@ -0,0 +1,22 @@
+#!/bin/sh
+# script to download and repack source package of bowtie which comes in zip format
+
+PKG=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
+VERSION=`uscan --verbose --force-download | \
+    grep "Newest version on remote site is .* local version is .*" | \
+    head -n 1 | \
+    sed "s/Newest version on remote site is \([-0-9.]\+\),.*/\1/"`
+
+mkdir -p ../tarballs
+cd ../tarballs
+
+UPSTREAMDIR=${PKG}-${VERSION}
+unzip ../"${UPSTREAMDIR}-src.zip"
+
+## remove copy of SeqAn library - unfortunately the package does not compile
+## with the Debian packaged version 1.2
+#rm -rf "${UPSTREAMDIR}"/SeqAn-1.1
+
+GZIP="--best --no-name" tar -czf "$PKG"_"$VERSION".orig.tar.gz "${UPSTREAMDIR}"
+rm -rf "${UPSTREAMDIR}"
+