X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=erange.git;a=blobdiff_plain;f=getsplicefa.py;fp=getsplicefa.py;h=819675f26f869895fc12b8058daf195f02b2d07b;hp=197800e09fab70bf2824bcf3e9caa1ecfb364ef1;hb=4ad5495359e4322da39868020a7398676261679e;hpb=cfc5602b26323ad2365295145e3f6c622d912eb4 diff --git a/getsplicefa.py b/getsplicefa.py index 197800e..819675f 100755 --- a/getsplicefa.py +++ b/getsplicefa.py @@ -20,6 +20,7 @@ def main(argv=None): delimiter = "|" usage = "usage: python getsplicefa.py genome ucscModels outfilename maxBorder [--verbose] [--spacer num]\ + \n\twhere ucscModels is the gene model file in same format as the UCSC Table Browser\ \n\twhere spacer is by default 2, and maxBorder should be readlen - (2 * spacer)\ \n\tdelimiter is set to %s - edit the code to change it, if necessary\n" % delimiter