development release: conversion of ReadDataset to use BAM files
authorSean Upchurch <sau@caltech.edu>
Mon, 2 Jul 2012 17:17:00 +0000 (10:17 -0700)
committerSean Upchurch <sau@caltech.edu>
Mon, 2 Jul 2012 17:17:00 +0000 (10:17 -0700)
commitcfc5602b26323ad2365295145e3f6c622d912eb4
treee5215341da24183eb12827445e02e70eafa1faa1
parentc4561c55cfa9726530c6777b6515c4ef66306b2f
development release: conversion of ReadDataset to use BAM files
21 files changed:
MakeBamFromRds.py
MakeRdsFromBam.py
ReadDataset.py
combineRPKMs.py
commoncode.py
findMotifs.py
findall.py
geneLocusCounts.py
geneMrnaCounts.py
geneMrnaCountsWeighted.py
getSNPGeneInfo.py
getSNPs.py
normalizeExpandedExonic.py
normalizeFinalExonic.py
rnaEditing.py
runRNAPairedAnalysis.py [new file with mode: 0644]
runSNPAnalysis.py [new file with mode: 0644]
runStandardAnalysis.py [new file with mode: 0644]
runStrandedAnalysis.py [new file with mode: 0644]
siteintersects.py
weighMultireads.py