setup.py

   1 from setuptools import setup, find_packages
   2 from version import get_git_version
   3
   4 setup(
   5     name="htsworkflow",
   6     version=get_git_version(),
   7     description="Utilities to help manage high-through-put sequencing",
   8     author="Diane Trout, Brandon King",
   9     author_email="diane@caltech.edu",
  10     packages=find_packages(),
  11     scripts=[
  12         "scripts/htsw-copier",
  13         "scripts/htsw-eland2bed",
  14         "scripts/htsw-elandseq",
  15         "scripts/htsw-gerald2bed",
  16         "scripts/htsw-get-config",
  17         "scripts/htsw-qseq2fastq",
  18         "scripts/htsw-record-runfolder",
  19         "scripts/htsw-runfolder",
  20         "scripts/htsw-runner",
  21         "scripts/htsw-spoolwatcher",
  22         "scripts/htsw-srf",
  23         "scripts/htsw-srf2fastq",
  24         "scripts/htsw-update-archive",
  25         "scripts/htsw-validate",
  26     ],
  27     # I should be using one or the other package import
  28     package_data = {
  29         '': ['*.turtle']
  30         },
  31     include_package_data=True,
  32     install_requires=['distribute',
  33                       'django >=1.6, <1.7',
  34                       'lxml >= 2.2.4',
  35                       'numpy >= 1.3',
  36                       'benderjab >= 0.2',
  37                       'httplib2',
  38                       'keyring',
  39                       'PyLD',
  40                       'requests',
  41                       # This dependency is redland librdf, which doesn't have a public egg
  42                       #'librdf >= 1.0.14',
  43     ],
  44 )