shutil.copy(cmdline[0], dest)
conn = sqlite3.connect(dest)
c = conn.cursor()
+
+ #Copy user id's from auth User to new HTSUser
+ c.execute('INSERT INTO samples_htsuser (user_ptr_id) SELECT id FROM auth_user;')
+
c.execute("""CREATE TEMPORARY TABLE experiments_flowcell_temp (
"id" integer NOT NULL PRIMARY KEY,
"flowcell_id" varchar(20) NOT NULL UNIQUE,
c.execute( lane_insert % {'lane': int(lane), 'id': int(pk)} )
c.execute('DROP TABLE experiments_flowcell_temp;')
+
conn.commit()
if __name__ == "__main__":