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Map junctions.bed to the Junctions view.
[htsworkflow.git]
/
extra
/
ucsc_encode_submission
/
ucsc_gather.py
diff --git
a/extra/ucsc_encode_submission/ucsc_gather.py
b/extra/ucsc_encode_submission/ucsc_gather.py
index 37ef73193f0ae98f680b9dfba6e3463b029a8feb..72d7f325e64b9d91966cf603dbd1a7236d683add 100755
(executable)
--- a/
extra/ucsc_encode_submission/ucsc_gather.py
+++ b/
extra/ucsc_encode_submission/ucsc_gather.py
@@
-596,6
+596,7
@@
class NameToViewMap(object):
('*.bai', None),
('*.bam', self._guess_bam_view),
('*.splices.bam', 'Splices'),
+ ('junctions.bed', 'Junctions'),
('*.jnct', 'Junctions'),
('*.plus.bigwig', 'PlusSignal'),
('*.minus.bigwig', 'MinusSignal'),