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DummyOptions didn't define a genome_dir member before trying to access it
[htsworkflow.git]
/
gaworkflow
/
pipeline
/
retrieve_config.py
diff --git
a/gaworkflow/pipeline/retrieve_config.py
b/gaworkflow/pipeline/retrieve_config.py
index 0003cff128b838165f68539ea62396228de0bfdd..6ffa7bbfb2d330a37e60450b9a56909cc515c17a 100644
(file)
--- a/
gaworkflow/pipeline/retrieve_config.py
+++ b/
gaworkflow/pipeline/retrieve_config.py
@@
-24,6
+24,7
@@
class DummyOptions:
self.url = None
self.output_filepath = None
self.flowcell = None
+ self.genome_dir = None
class PreformattedDescriptionFormatter(IndentedHelpFormatter):