DummyOptions didn't define a genome_dir member before trying to access it

[htsworkflow.git] / gaworkflow / pipeline / retrieve_config.py

diff --git a/gaworkflow/pipeline/retrieve_config.py b/gaworkflow/pipeline/retrieve_config.py
index 0003cff128b838165f68539ea62396228de0bfdd..6ffa7bbfb2d330a37e60450b9a56909cc515c17a 100644 (file)
--- a/gaworkflow/pipeline/retrieve_config.py
+++ b/gaworkflow/pipeline/retrieve_config.py
@@ -24,6 +24,7 @@ class DummyOptions:
     self.url = None
     self.output_filepath = None
     self.flowcell = None
+    self.genome_dir = None
 
 class PreformattedDescriptionFormatter(IndentedHelpFormatter):