remove all caltech pipeline specific code

[htsworkflow.git] / htsworkflow / automation / test / test_runner.py

diff --git a/htsworkflow/automation/test/test_runner.py b/htsworkflow/automation/test/test_runner.py
deleted file mode 100644 (file)
index 6c3b9df..0000000
--- a/htsworkflow/automation/test/test_runner.py
+++ /dev/null
@@ -1,46 +0,0 @@
-import unittest
-
-
-import os
-from htsworkflow.automation.copier import runfolder_validate
-
-def extract_runfolder_path(watchdir, event):
-  runfolder_path = watchdir
-  path = event.path
-  if not path.startswith(watchdir):
-    return None
-
-  fragments = path[len(watchdir):].split(os.path.sep)
-  for f in fragments:
-    runfolder_path = os.path.join(runfolder_path, f)
-    if runfolder_validate(f):
-      return runfolder_path
-  return None
-
-class Event(object):
-  def __init__(self, path=None, name=None):
-    self.path = path
-    self.name = name
-
-class testRunner(unittest.TestCase):
-
-    def test_extract_runfolder(self):
-        watchdir = os.path.join('root', 'server', 'mount')
-        runfolder = os.path.join(watchdir, '080909_HWI-EAS229_0052_1234ABCD')
-        ipar = os.path.join(runfolder, 'Data', 'IPAR_1.01')
-        other = os.path.join(watchdir, 'other')
-
-        event = Event( path=runfolder )
-        self.failUnlessEqual(extract_runfolder_path(watchdir, event), runfolder)
-        
-        event = Event( path=ipar )
-        self.failUnlessEqual(extract_runfolder_path(watchdir, event), runfolder)
-
-        event = Event( path=other)
-        self.failUnlessEqual(extract_runfolder_path(watchdir, event), None )
-        
-def suite():
-    return unittest.makeSuite(testRunner,'test')
-
-if __name__ == "__main__":
-    unittest.main(defaultTest="suite")