+from itertools import chain
from htsworkflow.frontend.experiments.models import \
FlowCell, DataRun, DataFile, FileType, ClusterStation, Sequencer, Lane
from django.contrib import admin
'=lane__library__id',
'lane__library__library_name')
list_display = ('flowcell_id','run_date','Lanes')
- list_filter = ('sequencer','cluster_station')
+ list_filter = ('sequencer','cluster_station', 'paired_end')
fieldsets = (
(None, {
'fields': ('run_date', ('flowcell_id','cluster_station','sequencer'),
# the goal is to replace the default select/combo box with one
# that can strike out disabled options.
attrs = field.widget.widget.attrs
- disabled_sequencers = field.queryset.filter(active=False)
- attrs['disabled_sequencers'] = [ unicode(s.id) for s in disabled_sequencers ]
- field.widget.widget = SequencerSelect(attrs=attrs)
+ field.widget.widget = SequencerSelect(attrs=attrs, queryset=field.queryset)
elif db_field.name == "notes":
field.widget.attrs["rows"] = "3"
return field
admin.site.register(FlowCell, FlowCellOptions)
class ClusterStationOptions(admin.ModelAdmin):
- list_display = ('name', )
- fieldsets = ( ( None, { 'fields': ( 'name', ) } ), )
+ list_display = ('name', 'isdefault',)
+ fieldsets = ( ( None, { 'fields': ( 'name', 'isdefault') } ), )
admin.site.register(ClusterStation, ClusterStationOptions)
class SequencerSelect(Select):
+ def __init__(self, queryset=None, *args, **kwargs):
+ super(SequencerSelect, self).__init__(*args, **kwargs)
+ self.queryset = queryset
+
+ def render_options(self, choices, selected_choices):
+ # Normalize to strings.
+ selected_choices = set([force_unicode(v) for v in selected_choices])
+ output = []
+ for option_value, option_label in chain(self.choices, choices):
+ if isinstance(option_label, (list, tuple)):
+ output.append(u'<optgroup label="%s">' % escape(force_unicode(option_value)))
+ for option in option_label:
+ output.append(self.render_option(selected_choices, *option))
+ output.append(u'</optgroup>')
+ else:
+ output.append(self.render_option(selected_choices, option_value, option_label))
+ return u'\n'.join(output)
+
+ # render_options blatently grabbed from 1.3.1 as the 1.2 version
+ # has render_option, which is what I needed to overload as a
+ # nested function in render_options
+ def render_options(self, choices, selected_choices):
+ # Normalize to strings.
+ selected_choices = set([force_unicode(v) for v in selected_choices])
+ output = []
+ for option_value, option_label in chain(self.choices, choices):
+ if isinstance(option_label, (list, tuple)):
+ output.append(u'<optgroup label="%s">' % escape(force_unicode(option_value)))
+ for option in option_label:
+ output.append(self.render_option(selected_choices, *option))
+ output.append(u'</optgroup>')
+ else:
+ output.append(self.render_option(selected_choices, option_value, option_label))
+ return u'\n'.join(output)
+
+
def render_option(self, selected_choices, option_value, option_label):
- disabled_sequencers = self.attrs.get('disabled_sequencers', [])
+ disabled_sequencers = [ unicode(s.id) for s in self.queryset.filter(active=False) ]
option_value = unicode(option_value)
selected_html = (option_value in selected_choices) and u' selected="selected"' or ''
cssclass = "strikeout" if option_value in disabled_sequencers else ''
conditional_escape(force_unicode(option_label)))
class SequencerOptions(admin.ModelAdmin):
- list_display = ('name', 'active', 'instrument_name', 'model')
+ list_display = ('name', 'active', 'isdefault', 'instrument_name', 'model')
fieldsets = ( ( None,
{ 'fields': (
- 'name', 'active', 'instrument_name', 'serial_number',
+ 'name', ('active', 'isdefault'), 'instrument_name', 'serial_number',
'model', 'comment') } ), )
admin.site.register(Sequencer, SequencerOptions)