Update exception caught for newer django?

[htsworkflow.git] / htsworkflow / frontend / experiments / models.py

diff --git a/htsworkflow/frontend/experiments/models.py b/htsworkflow/frontend/experiments/models.py
index 7a41d3d5902aebe32a56595db04dd859aa6e016d..e3771cbde31be4f654fd44dc5b043ed847144257 100644 (file)
--- a/htsworkflow/frontend/experiments/models.py
+++ b/htsworkflow/frontend/experiments/models.py
@@ -20,7 +20,7 @@ LOGGER = logging.getLogger(__name__)
 default_pM = 5
 try:
     default_pM = int(settings.DEFAULT_PM)
-except ValueError, e:
+except AttributeError, e:
     LOGGER.error("invalid value for frontend.default_pm")
 
 # how many days to wait before trying to re-import a runfolder
@@ -248,8 +248,10 @@ class FlowCell(models.Model):
             run.image_version = run_xml_data.image_analysis.version
             run.basecall_software = run_xml_data.bustard.software
             run.basecall_version = run_xml_data.bustard.version
-            run.alignment_software = run_xml_data.gerald.software
-            run.alignment_version = run_xml_data.gerald.version
+            # we're frequently not running alignments
+            if run_xml_data.gerald:
+                run.alignment_software = run_xml_data.gerald.software
+                run.alignment_version = run_xml_data.gerald.version
 
             run.last_update_time = datetime.datetime.now()
             run.save()