Merge branch 'add-condition'

[htsworkflow.git] / htsworkflow / frontend / templates / samples / library_detail.html

diff --git a/htsworkflow/frontend/templates/samples/library_detail.html b/htsworkflow/frontend/templates/samples/library_detail.html
index 412f201c0b26d5e1bafcca0e8637743122939c98..2c2d90bf793acfb87e34d4be28997444e86705f6 100644 (file)
--- a/htsworkflow/frontend/templates/samples/library_detail.html
+++ b/htsworkflow/frontend/templates/samples/library_detail.html
@@ -170,11 +170,11 @@
   </thead>
   <tbody>
     {% for result in eland_results %}
-    <tr about="/flowcell/{{result.flowcell_id}}/lane/{{result.lane}}">
+    <tr about="{{result.flowcell.get_absolute_url}}">
       <td property="libns:date" content="{{result.run_date|date:'Y-m-d\TH:i:s'}}" datatype="xsd:dateTime">{{ result.run_date|date}}</td>
       <td>{{ result.cycle }}</td>
-      <td property="libns:flowcell_id">{{ result.flowcell_id }}</td>
-      <td property="libns:lane">{{ result.lane }}</td>
+      <td><a href="{{result.flowcell.get_absolute_url}}"><span property="libns:flowcell_id">{{ result.flowcell_id }}</span></a></td>
+      <td><a href="{{result.lane.get_absolute_url}}" rel="libns:has_lane"><span property="libns:lane_number" datatype="xsd:decimal">{{ result.lane.lane_number }}</span></a></td>
       <td><a href="{{ result.summary_url }}">Summary</a></td>
       <td><a href="{{ result.result_url }}">{{ result.result_label }}</a></td>
       <td>
@@ -228,7 +228,7 @@
     <tbody>
   
       {% for lane in lane_summary_list %}
-      <tr about="/flowcell/{{lane.flowcell_id}}/lane/{{lane.lane_id}}/end/{% if lane.end %}{{ lane.end }}{% endif %}">
+      <tr about="/flowcell/{{lane.flowcell_id}}/{{lane.lane_id}}/{% if lane.end %}#end{{ lane.end }}{% endif %}">
         <td>{{ lane.cycle_width }}</td>
         <td>{{ lane.flowcell_id }}</td>
         <td>{{ lane.lane_id }}</td>
@@ -264,30 +264,17 @@
     </thead>
     <tbody>
       {% for lane in lib.lane_set.all %}
-      <tr>
-        <td>{{ lane.flowcell.flowcell_id }}</td>
-        <td>{{ lane.lane_number }}</td>
+      <tr rel="libns:has_lane" resource="{{lane.get_absolute_url}}">
+        <td><a href="{{lane.flowcell.get_absolute_url}}" rel="libns:flowcell">
+            <span property="libns:flowcell_id">{{ lane.flowcell.flowcell_id }}</span></a></td>
+        <td><a href="{{lane.get_absolute_url}}"> 
+            <span property="libns:lane_number"  datatype="xsd:decimal"
+               >{{ lane.lane_number }}</span></a></td>
         <td>{{ lane.comment }}</td>
       </tr>
          {% endfor %}
     </tbody>
   </table>
-  <br/>
-  <hr/>
-  <h2>Count of multi-reads</h2>
-  {% for lane in lane_summary_list %}
-    {% if lane.summarized_reads %}
-    <h3>
-      {{lane.cycle_width}} {{ lane.flowcell_id }} lane {{ lane.lane_id }} 
-      {% if lane.end %} end {{ lane.end }}{% endif %}
-    </h3>
-    <ul>
-      {% for name, counts in lane.summarized_reads.items %}
-      <li><b>{{ name }}</b>: {{ counts|intcomma }}</li>
-      {% endfor %}
-    </ul>
-    {% endif %}
-  {% endfor %}
   {% endblock %}
   </div>
 </div>