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convert has_key to X in dictionary
[htsworkflow.git]
/
htsworkflow
/
pipelines
/
bustard.py
diff --git
a/htsworkflow/pipelines/bustard.py
b/htsworkflow/pipelines/bustard.py
index 5df79c7fb80eb3afd5cba76f536e6c194a39d533..68ecc75c1fcbc9c6c969032cdef3995c1a99a3f0 100644
(file)
--- a/
htsworkflow/pipelines/bustard.py
+++ b/
htsworkflow/pipelines/bustard.py
@@
-309,7
+309,7
@@
class Bustard(object):
# add phasing parameters
for lane in LANE_LIST:
- if
self.phasing.has_key(lane)
:
+ if
lane in self.phasing
:
params.append(self.phasing[lane].get_elements())
# add crosstalk matrix if it exists