projects
/
htsworkflow.git
/ blobdiff
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
raw
| inline |
side by side
Thrown an exception if we can't parse base calling directory.
[htsworkflow.git]
/
htsworkflow
/
pipelines
/
bustard.py
diff --git
a/htsworkflow/pipelines/bustard.py
b/htsworkflow/pipelines/bustard.py
index b5bf7e11a925940b284e655932c4aa602b523838..99f231dd73e748a0c88b528f4489968ab20b8428 100644
(file)
--- a/
htsworkflow/pipelines/bustard.py
+++ b/
htsworkflow/pipelines/bustard.py
@@
-365,6
+365,9
@@
def bustard(pathname):
else:
b = bustard_from_ga1(pathname)
+ if not b:
+ raise RuntimeError("Unable to parse base-call directory at %s" % (pathname,))
+
return b
def bustard_from_ga1(pathname):