add --clean option to runfolder

[htsworkflow.git] / htsworkflow / pipelines / ipar.py

diff --git a/htsworkflow/pipelines/ipar.py b/htsworkflow/pipelines/ipar.py
index a9544203afb7ee255c834f07e83ecbed91c39e67..239239ecbf17aa1247d6185d8dd528b0e87eb11d 100644 (file)
--- a/htsworkflow/pipelines/ipar.py
+++ b/htsworkflow/pipelines/ipar.py
@@ -189,6 +189,7 @@ def ipar(pathname):
     """
     logging.info("Searching IPAR directory")
     i = IPAR()
+    i.pathname = pathname
 
     # parse firecrest directory name
     path, name = os.path.split(pathname)