For pipeline 1.1rc1 or 1.3.2, look for the matrix files in the bustard dir

[htsworkflow.git] / htsworkflow / pipelines / runfolder.py

diff --git a/htsworkflow/pipelines/runfolder.py b/htsworkflow/pipelines/runfolder.py
index e1072400716b1bb3affd5c65158baf63701feadb..b8cbc56b1902aaf7b9d7f790b4dba71929c6d9c9 100644 (file)
--- a/htsworkflow/pipelines/runfolder.py
+++ b/htsworkflow/pipelines/runfolder.py
@@ -321,6 +321,8 @@ def extract_results(runs, output_base_dir=None):
       # save run file
       r.save(cycle_dir)
 
+      return
+
       # Copy Summary.htm
       summary_path = os.path.join(r.gerald.pathname, 'Summary.htm')
       if os.path.exists(summary_path):