Progress using rdf model to link fastqs with flowcell/lib metadata.

[htsworkflow.git] / htsworkflow / pipelines / test / test_sequences.py

diff --git a/htsworkflow/pipelines/test/test_sequences.py b/htsworkflow/pipelines/test/test_sequences.py
index d051c036ca2eddda6ffbbc1cc3f1c1f31bb5fcea..34ddeab593da5636386a7f0a7254a5e2af1b53e4 100644 (file)
--- a/htsworkflow/pipelines/test/test_sequences.py
+++ b/htsworkflow/pipelines/test/test_sequences.py
@@ -344,13 +344,19 @@ class SequenceFileTests(unittest.TestCase):
             seq.save_to_model(model)
 
         files = list(model.find_statements(
-            RDF.Statement(None, rdfNS['type'], libraryOntology['raw_file'])))
+            RDF.Statement(None,
+                          rdfNS['type'],
+                          libraryOntology['illumina_result'])))
         self.assertEqual(len(files), 5)
         files = list(model.find_statements(
-            RDF.Statement(None, rdfNS['type'], libraryOntology['qseq'])))
+            RDF.Statement(None,
+                          libraryOntology['file_type'],
+                          libraryOntology['qseq'])))
         self.assertEqual(len(files), 4)
         files = list(model.find_statements(
-            RDF.Statement(None, rdfNS['type'], libraryOntology['split_fastq'])))
+            RDF.Statement(None,
+                          libraryOntology['file_type'],
+                          libraryOntology['split_fastq'])))
         self.assertEqual(len(files), 1)
 
         files = list(model.find_statements(