Rename stripNamespace strip_namespace

[htsworkflow.git] / htsworkflow / submission / submission.py

diff --git a/htsworkflow/submission/submission.py b/htsworkflow/submission/submission.py
index 626897061ea4d9e4c78141a4cba65c4713011507..5077996b8abb535e8aeb9bae2409d0f0f2fede09 100644 (file)
--- a/htsworkflow/submission/submission.py
+++ b/htsworkflow/submission/submission.py
@@ -11,7 +11,7 @@ from htsworkflow.util.rdfhelp import \
      dump_model, \
      fromTypedNode, \
      get_model, \
-     stripNamespace, \
+     strip_namespace, \
      toTypedNode
 from htsworkflow.util.rdfns import *
 from htsworkflow.util.hashfile import make_md5sum
@@ -348,6 +348,8 @@ class Submission(object):
                   'Small RNA (non-multiplexed)',]
         paired = ['Barcoded Illumina',
                   'Multiplexing',
+                  'NEBNext Multiplexed',
+                  'NEBNext Small RNA',
                   'Nextera',
                   'Paired End (non-multiplexed)',
                   'Dual Index Illumina',]
@@ -388,7 +390,7 @@ def list_submissions(model):
     query = RDF.SPARQLQuery(query_body)
     rdfstream = query.execute(model)
     for row in rdfstream:
-        s = stripNamespace(submissionLog, row['submission'])
+        s = strip_namespace(submissionLog, row['submission'])
         if s[-1] in ['#', '/', '?']:
             s = s[:-1]
         yield s