from pprint import pprint
import shutil
import tempfile
-import unittest
+
+from django.test import TestCase
+from django.test.utils import setup_test_environment, \
+ teardown_test_environment
+from django.db import connection
+from django.conf import settings
from htsworkflow.submission.condorfastq import CondorFastqExtract
from htsworkflow.submission.results import ResultMap
libns:made_by "Gary Gygax"@en ;
libns:name "Paired Ends ASDF"@en ;
libns:replicate "1"@en;
- libns:species "Mus musculus"@en ;
+ libns:species_name "Mus musculus"@en ;
libns:stopping_point "Completed"@en ;
libns:total_unique_locations 8841201 .
# cell_line
-
<http://localhost/library/12345/>
a libns:Library ;
libns:affiliation "TSR"@en;
libns:made_by "Gary Gygax"@en ;
libns:name "Paired Ends THING"@en ;
libns:replicate "1"@en;
- libns:species "Mus musculus"@en ;
+ libns:species_name "Mus musculus"@en ;
libns:stopping_point "Completed"@en ;
libns:total_unique_locations 8841201 .
# cell_line
"""
HOST = "http://localhost"
-class TestCondorFastq(unittest.TestCase):
+class TestCondorFastq(TestCase):
def setUp(self):
self.cwd = os.getcwd()
def suite():
- suite = unittest.makeSuite(TestCondorFastq, 'test')
+ from unittest import TestSuite, defaultTestLoader
+ suite = TestSuite()
+ suite.addTests(defaultTestLoader.loadTestsFromTestCase(TestCondorFastq))
return suite
if __name__ == "__main__":
- unittest.main(defaultTest='suite')
-
+ from unittest import main
+ main(defaultTest='suite')