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Update test to work with species -> species_name rename.
[htsworkflow.git]
/
htsworkflow
/
submission
/
test
/
test_daf.py
diff --git
a/htsworkflow/submission/test/test_daf.py
b/htsworkflow/submission/test/test_daf.py
index c7227216e42d2582129c8dae9dacc1d88638b499..7959d1e13d9a323281885d63454790f34f85c48f 100644
(file)
--- a/
htsworkflow/submission/test/test_daf.py
+++ b/
htsworkflow/submission/test/test_daf.py
@@
-247,7
+247,7
@@
thisView:FastqRd1 dafTerm:filename_re ".*\\\\.fastq" ;
# server is 500 for this library
self.failUnlessEqual(gel_cut, 100)
# server is 500 for this library
self.failUnlessEqual(gel_cut, 100)
- species = daf_mapper._get_library_attribute(libNode, 'species')
+ species = daf_mapper._get_library_attribute(libNode, 'species
_name
')
self.failUnlessEqual(species, "Homo sapiens")
with mktempdir('analysis') as analysis_dir:
self.failUnlessEqual(species, "Homo sapiens")
with mktempdir('analysis') as analysis_dir: