self.assertEqual(obj['@context']['OBO'], 'http://purl.obolibrary.org/obo/')
+ def test_convert_search_to_jsonld(self):
+ example = {'count': {'biosamples': 2},
+ 'portal_title': 'ENCODE',
+ 'title': 'Search',
+ 'notification': 'Success',
+ 'filters': [],
+ '@id': '/search/?searchTerm=wold',
+ '@type': ['search'],
+ 'facets': [],
+ '@graph': [{
+ u'@id': u'/biosamples/ENCBS125ENC/',
+ u'@type': [u'biosample', u'item'],
+ u'accession': u'ENCBS125ENC',
+ u'award.rfa': u'ENCODE2-Mouse',
+ u'biosample_term_name': u'myocyte',
+ u'biosample_type': u'in vitro differentiated cells',
+ u'characterizations.length': [],
+ u'constructs.length': [],
+ u'lab.title': u'Barbara Wold, Caltech',
+ u'life_stage': u'unknown',
+ u'organism.name': u'mouse',
+ u'source.title': u'Barbara Wold',
+ u'status': u'CURRENT',
+ u'treatments.length': []},
+ {u'@id': u'/biosamples/ENCBS126ENC/',
+ u'@type': [u'biosample', u'item'],
+ u'accession': u'ENCBS126ENC',
+ u'award.rfa': u'ENCODE2-Mouse',
+ u'biosample_term_name': u'myocyte',
+ u'biosample_type': u'in vitro differentiated cells',
+ u'characterizations.length': [],
+ u'constructs.length': [],
+ u'lab.title': u'Barbara Wold, Caltech',
+ u'life_stage': u'unknown',
+ u'organism.name': u'mouse',
+ u'source.title': u'Barbara Wold',
+ u'status': u'CURRENT',
+ u'treatments.length': []},
+ ]}
+
+ encode = ENCODED('test.encodedcc.org')
+ result = encode.convert_search_to_jsonld(example)
+ for obj in result['@graph']:
+ self.assertNotIn('award.rfa', obj)
+
def _verify_context(self, context, obj_type):
for context_key in [None, obj_type]:
for k in ENCODED_CONTEXT[context_key]: