move experiment templates into the experiments app
[htsworkflow.git] / htsworkflow / templates / experiments / flowcellSheet.html
diff --git a/htsworkflow/templates/experiments/flowcellSheet.html b/htsworkflow/templates/experiments/flowcellSheet.html
deleted file mode 100644 (file)
index 103b045..0000000
+++ /dev/null
@@ -1,87 +0,0 @@
-<html><head><title>{{ fc.flowcell_id }} - GA SEQUENCING (SOLEXA) LOG</title>
-<style type="text/css">
-<!--
-TD
-  {
-  color:black;
-  font-size:9pt;
-  font-face:Arial;
-  }
--->
-</style>
-</head><body>
-{% if fc %}
-<table border="1" cellspacing="1">
-<tr><td colspan=2 nowrap><b>GA SEQUENCING (SOLEXA) LOG</b></td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>Date Run Started</td><td colspan=2>{{ fc.run_date }}</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>Cluster station used</td><td colspan=2 nowrap>{{ fc.cluster_station.name }}</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>GA used</td><td colspan=2 nowrap>{{ fc.sequencer.name }}</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-
-<tr><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>Flowcell number</td><td colspan=2 nowrap>{{ fc.flowcell_id }}</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>Number of Tiles per Lane</td><td>100</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>Number of Cycles</td><td>{{ fc.read_length  }}</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td><font point-size="9" face="Arial"><b>SAMPLE INFORMATION</b><font></td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td></tr>
-<tr><td>&nbsp;</td><td>FC#</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td><td colspan=2 nowrap>FC bar code</td></tr>
-
-<tr><td valign=middle nowrap>Lane</td>
-{% for lane in fc.lane_set.all %}
-<td>{{ lane.lane_number }}</td>
-{% endfor %}
-</tr>
-<tr><td valign=middle nowrap>Solexa Library Number</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.id }}</td>
-{% endfor %}
-</tr>
-
-<tr><td valign=middle nowrap>Sample Name</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.library_name }}</td>
-{% endfor %}
-</tr>
-
-<tr><td valign=middle nowrap>Organism</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.library_species.scientific_name }}</td>
-{% endfor %}
-</tr>
-
-<tr><td valign=middle nowrap>Submitter</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.made_for }}</td>
-{% endfor %}
-</tr>
-
-
-<tr><td valign=middle nowrap>First time run?</td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td><td bgcolor=#CCFFCC></td></tr>
-
-<tr><td valign=middle nowrap>Gel Cut Size (bp)</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.gel_cut_size }}</td>
-{% endfor %}
-</tr>  
-
-<tr><td valign=middle nowrap>Template Concentration (ng/ul)</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.library.undiluted_concentration }}</td>
-{% endfor %}
-</tr>
-
-<tr><td valign=middle nowrap>Run Concentration (pM)</td>
-{% for lane in fc.lane_set.all %}
-<td bgcolor=#CCFFCC>{{ lane.pM }}</td>
-{% endfor %}
-</tr>
-
-</table>
-
-{% else %}
-    <p>Flowcell object missing. Can't create sheet.</p>
-{% endif %}
-
-</body></html