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Initial port to python3
[htsworkflow.git]
/
scripts
/
rerun_eland.py
diff --git
a/scripts/rerun_eland.py
b/scripts/rerun_eland.py
index 01c7a9f00361980b2627d0ba1a3b35a497810f6b..6741bca9053a37b72ccbf48291c344e2a700e26a 100644
(file)
--- a/
scripts/rerun_eland.py
+++ b/
scripts/rerun_eland.py
@@
-73,7
+73,7
@@
def rerun(gerald_dir, output_dir, length=25, dry_run=False):
if not dry_run: os.mkdir(output_dir)
processes = []
- for lane_id, lane_param in
g.lanes.items(
):
+ for lane_id, lane_param in
list(g.lanes.items()
):
eland = g.eland_results[lane_id]
inpathname = eland.pathname