Test htsworkflow under several different django & python versions

[htsworkflow.git] / setup.py

diff --git a/setup.py b/setup.py
index 0dc2dbf6636e75111bac102be147875634c79cfe..802c82f91261f8f0b29693b4673faf47f2759f39 100644 (file)
--- a/setup.py
+++ b/setup.py
@@ -1,13 +1,50 @@
-from setuptools import setup
+from setuptools import setup, find_packages
+from version import get_git_version
 
 setup(
-  name="uashelper",
-  description="some bots and other utilities to help deal with data from an illumina sequencer",
-  author="Diane Trout",
-  author_email="diane@caltech.edu",
-  packages=["uashelper"],
-  scripts=['scripts/spoolwatcher', 
-           'scripts/copier',
-           'scripts/retreive_config',
-           'scripts/configure_pipeline'],
+    name="htsworkflow",
+    version=get_git_version(),
+    description="Utilities to help manage high-through-put sequencing",
+    author="Diane Trout, Brandon King",
+    author_email="diane@caltech.edu",
+    packages=find_packages(),
+    scripts=[
+        "scripts/htsw-copier",
+        "scripts/htsw-eland2bed",
+        "scripts/htsw-elandseq",
+        "scripts/htsw-gerald2bed",
+        "scripts/htsw-get-config",
+        "scripts/htsw-qseq2fastq",
+        "scripts/htsw-record-runfolder",
+        "scripts/htsw-runfolder",
+        "scripts/htsw-runner",
+        "scripts/htsw-spoolwatcher",
+        "scripts/htsw-srf",
+        "scripts/htsw-srf2fastq",
+        "scripts/htsw-update-archive",
+        "scripts/htsw-validate",
+    ],
+    # I should be using one or the other package import
+    package_data={
+        '': ['*.turtle']
+        },
+    include_package_data=True,
+    install_requires=[
+        'distribute',
+        'django >=1.7, <1.8',
+        'lxml >= 2.2.4',
+        'numpy >= 1.6',
+        'pandas',
+        # 'benderjab >= 0.2',
+        'httplib2',
+        'keyring',
+        'jsonschema',
+        'PyLD',
+        'requests',
+        'six',
+        'psycopg2',
+        'pytz',
+        'rdflib',
+        'factory_boy',
+    ],
 )