remove all caltech pipeline specific code

[htsworkflow.git] / test / test_copier.py

diff --git a/test/test_copier.py b/test/test_copier.py
deleted file mode 100644 (file)
index 9a1b738..0000000
--- a/test/test_copier.py
+++ /dev/null
@@ -1,67 +0,0 @@
-import unittest
-
-from StringIO import StringIO
-from htsworkflow.automation import copier
-
-class testCopier(unittest.TestCase):
-    def test_runfolder_validate(self):
-        self.failUnlessEqual(copier.runfolder_validate(""), False)
-        self.failUnlessEqual(copier.runfolder_validate("1345_23"), False)
-        self.failUnlessEqual(copier.runfolder_validate("123456_asdf-$23'"), False)
-        self.failUnlessEqual(copier.runfolder_validate("123456_USI-EAS44"), True)
-        self.failUnlessEqual(copier.runfolder_validate("123456_USI-EAS44 "), False)
-        
-    def test_empty_config(self):
-        cfg = StringIO("""[fake]
-something: unrelated
-""")
-        bot = copier.CopierBot('fake', configfile=cfg)
-        self.failUnlessRaises(RuntimeError, bot.read_config)
-        
-    def test_full_config(self):
-        cfg = StringIO("""[copier]        
-jid: copier@example.fake
-password: badpassword
-authorized_users: user1@example.fake user2@example.fake
-rsync_password_file: ~/.sequencer
-rsync_source: /tmp/sequencer_source
-rsync_destination: /tmp/sequencer_destination
-notify_users: user3@example.fake
-# who to run to
-#runner:
-""")
-        c = copier.CopierBot("copier", configfile=cfg)
-        c.read_config()
-        self.failUnlessEqual(c.jid, 'copier@example.fake')
-        self.failUnlessEqual(c.cfg['password'], 'badpassword')
-        self.failUnlessEqual(len(c.authorized_users), 2)
-        self.failUnlessEqual(c.authorized_users[0], 'user1@example.fake')
-        self.failUnlessEqual(c.authorized_users[1], 'user2@example.fake')
-        self.failUnlessEqual(c.rsync.source_base, '/tmp/sequencer_source')
-        self.failUnlessEqual(c.rsync.dest_base, '/tmp/sequencer_destination')
-        self.failUnlessEqual(len(c.notify_users), 1)
-        self.failUnlessEqual(c.notify_users[0], 'user3@example.fake')
-
-    def test_dirlist_filter(self):
-       """
-       test our dir listing parser
-       """
-       # everyone should have a root dir, and since we're not
-       # currently writing files... it should all be good
-       r = copier.rsync('/', '/', '/')
-
-       listing = [
-         'drwxrwxr-x           0 2007/12/29 12:34:56 071229_USI-EAS229_001_FC1234\n',
-         '-rwxrw-r--      123268 2007/12/29 17:39:31 2038EAAXX.rtf\n',
-         '-rwxrw-r--           6 2007/12/29 15:10:29 New Text Document.txt\n',
-       ]
-
-       result = r.list_filter(listing)
-       self.failUnlessEqual(len(result), 1)
-       self.failUnlessEqual(result[0][-1], '4')
-
-def suite():
-    return unittest.makeSuite(testCopier,'test')
-
-if __name__ == "__main__":
-    unittest.main(defaultTest="suite")