-import unittest
+from unittest import TestCase, skipIf
from StringIO import StringIO
-from htsworkflow.automation import copier
from htsworkflow.automation.solexa import is_runfolder
-class testCopier(unittest.TestCase):
+try:
+ from htsworkflow.automation import copier
+ BENDERJAB_UNAVAILABLE = False
+except ImportError as e:
+ BENDERJAB_UNAVAILABLE = True
+
+@skipIf(BENDERJAB_UNAVAILABLE, "Can't test copier daemon without a working benderjab")
+class testCopier(TestCase):
def test_empty_config(self):
cfg = StringIO("""[fake]
something: unrelated
""")
bot = copier.CopierBot('fake', configfile=cfg)
self.failUnlessRaises(RuntimeError, bot.read_config)
-
+
def test_full_config(self):
- cfg = StringIO("""[copier]
+ cfg = StringIO("""[copier]
jid: copier@example.fake
password: badpassword
authorized_users: user1@example.fake user2@example.fake
self.failUnlessEqual(len(c.authorized_users), 2)
self.failUnlessEqual(c.authorized_users[0], 'user1@example.fake')
self.failUnlessEqual(c.authorized_users[1], 'user2@example.fake')
- self.failUnlessEqual(c.rsync.source_base_list[0],
+ self.failUnlessEqual(c.rsync.source_base_list[0],
'rsync://localhost/tmp/sequencer_source/')
self.failUnlessEqual(c.rsync.dest_base, '/tmp/sequencer_destination')
self.failUnlessEqual(len(c.notify_users), 1)
self.failUnlessEqual(c.validate_url('rsync://other/tmp'), None)
self.failUnlessEqual(c.validate_url('http://localhost/tmp'), None)
# In the rsync process the URL gets a trailing '/' added to it
- # But in the bot config its still slash-less.
+ # But in the bot config its still slash-less.
# It is debatable when to add the trailing slash.
self.failUnlessEqual(
- c.validate_url('rsync://localhost/tmp/sequencer_source'),
- 'rsync://localhost/tmp/sequencer_source')
+ c.validate_url('rsync://localhost/tmp/sequencer_source'),
+ 'rsync://localhost/tmp/sequencer_source')
self.failUnlessEqual(
- c.validate_url('rsync://localhost/tmp/sequencer_source/'),
+ c.validate_url('rsync://localhost/tmp/sequencer_source/'),
'rsync://localhost/tmp/sequencer_source/')
self.failUnlessEqual(
- c.validate_url('rsync://localhost/tmp/sequencer_source/bleem'),
+ c.validate_url('rsync://localhost/tmp/sequencer_source/bleem'),
'rsync://localhost/tmp/sequencer_source/bleem')
self.failUnlessEqual(
c.validate_url('rsync://user@server:1234/other_sequencer'),
self.failUnlessEqual(len(result), 1)
self.failUnlessEqual(result[0][-1], '4')
+
def suite():
- return unittest.makeSuite(testCopier,'test')
+ from unittest import TestSuite, defaultTestLoader
+ suite = TestSuite()
+ suite.addTests(defaultTestLoader.loadTestsFromTestCase(testCopier))
+ return suite
+
if __name__ == "__main__":
- unittest.main(defaultTest="suite")
+ from unittest import main
+ main(defaultTest="suite")