X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=encode_submission%2Fencode3.py;fp=encode_submission%2Fencode3.py;h=0f474d7434fd10f5f2762eeb46619e7d90e1dcd8;hp=875d3bdd9d8205df2eaff65b2b48b5462366645a;hb=53ebb47e86e81ce349d4ef4e16aef94be93486ea;hpb=4262586d10cc0cc227390873b301b55244204c11 diff --git a/encode_submission/encode3.py b/encode_submission/encode3.py index 875d3bd..0f474d7 100644 --- a/encode_submission/encode3.py +++ b/encode_submission/encode3.py @@ -2,7 +2,7 @@ """ #!/usr/bin/env python -from ConfigParser import SafeConfigParser +from configparser import SafeConfigParser import fnmatch from glob import glob import json @@ -12,14 +12,14 @@ from optparse import OptionParser, OptionGroup import os from pprint import pprint, pformat import shlex -from StringIO import StringIO +from io import StringIO import stat import sys import time import types -import urllib -import urllib2 -import urlparse +import urllib.request, urllib.parse, urllib.error +import urllib.request, urllib.error, urllib.parse +import urllib.parse from zipfile import ZipFile import RDF @@ -130,7 +130,7 @@ def main(cmdline=None): if opts.print_rdf: writer = get_serializer() - print writer.serialize_model_to_string(model) + print(writer.serialize_model_to_string(model)) def make_manifest(mapper, results, filename=None):