X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Ffrontend%2Feland_config%2Fviews.py;h=f63caf4e5b74e570b7425e27ec470b195388904d;hp=d21f86bb9d9995a9bb3dd1e69c08fe3ddc8a44d3;hb=refs%2Fheads%2Fpython3-django1.5;hpb=4262586d10cc0cc227390873b301b55244204c11 diff --git a/htsworkflow/frontend/eland_config/views.py b/htsworkflow/frontend/eland_config/views.py index d21f86b..f63caf4 100644 --- a/htsworkflow/frontend/eland_config/views.py +++ b/htsworkflow/frontend/eland_config/views.py @@ -273,7 +273,7 @@ def getElandConfig(flowcell, regenerate=False): #Convert all newline conventions to unix style for lane in fcObj.lane_set.all(): data.append("# Lane%d: %s | %s" % \ - (lane.lane_number, unicode(lane.library.id), lane.library.library_name.replace('%', '%%'))) + (lane.lane_number, str(lane.library.id), lane.library.library_name.replace('%', '%%'))) #data.append("GENOME_DIR %s" % (BASE_DIR)) #data.append("CONTAM_DIR %s" % (BASE_DIR)) @@ -288,9 +288,9 @@ def getElandConfig(flowcell, regenerate=False): #l1s = form['lane1_species'] for lane in fcObj.lane_set.all(): species = lane.library.library_species.scientific_name - genome_dict.setdefault(species, []).append(unicode(lane.lane_number)) + genome_dict.setdefault(species, []).append(str(lane.lane_number)) - genome_list = genome_dict.keys() + genome_list = list(genome_dict.keys()) genome_list.sort() #Loop through and create entries for each species.