X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Ffrontend%2Fexperiments%2Ftests.py;h=a4a53155f7fa3ca88f11a4b44da48ee74305dcb8;hp=6f4bc3dbf5e602299dd7d0d6d4ae3d468a9fa37c;hb=45bea53077b4e46618320beee76682d441e0a1c7;hpb=f22eb99f314ed48ceb0062dffe4f8f25c7cf09dd diff --git a/htsworkflow/frontend/experiments/tests.py b/htsworkflow/frontend/experiments/tests.py index 6f4bc3d..a4a5315 100644 --- a/htsworkflow/frontend/experiments/tests.py +++ b/htsworkflow/frontend/experiments/tests.py @@ -6,6 +6,7 @@ except ImportError, e: from django.test import TestCase from htsworkflow.frontend.experiments import models from htsworkflow.frontend.experiments import experiments +from htsworkflow.frontend.auth import apidata class ExperimentsTestCases(TestCase): fixtures = ['test_flowcells.json'] @@ -36,9 +37,10 @@ class ExperimentsTestCases(TestCase): self.failUnlessEqual(lane_dict['library_name'], lane.library.library_name) self.failUnlessEqual(lane_dict['library_id'], lane.library.library_id) self.failUnlessAlmostEqual(lane_dict['pM'], float(lane.pM)) + self.failUnlessEqual(lane_dict['library_species'], + lane.library.library_species.scientific_name) - self.client.login(username='test', password='BJOKL5kAj6aFZ6A5') - response = self.client.get('/experiments/config/%s/json' % (fc_id,)) + response = self.client.get('/experiments/config/%s/json' % (fc_id,), apidata) # strptime isoformat string = '%Y-%m-%dT%H:%M:%S' fc_json = json.loads(response.content) self.failUnlessEqual(fc_json['flowcell_id'], fc_id) @@ -57,35 +59,38 @@ class ExperimentsTestCases(TestCase): self.failUnlessEqual(lane_dict['library_name'], lane.library.library_name) self.failUnlessEqual(lane_dict['library_id'], lane.library.library_id) self.failUnlessAlmostEqual(lane_dict['pM'], float(lane.pM)) + self.failUnlessEqual(lane_dict['library_species'], + lane.library.library_species.scientific_name) def test_invalid_flowcell(self): """ Make sure we get a 404 if we request an invalid flowcell ID """ - self.client.login(username='test', password='BJOKL5kAj6aFZ6A5') - response = self.client.get('/experiments/config/nottheone/json') + response = self.client.get('/experiments/config/nottheone/json', apidata) self.failUnlessEqual(response.status_code, 404) - def test_not_logged_in(self): + def test_no_key(self): """ Require logging in to retrieve meta data """ response = self.client.get(u'/experiments/config/303TUAAXX/json') - self.failUnlessEqual(response.status_code, 302) + self.failUnlessEqual(response.status_code, 403) def test_library_id(self): """ Library IDs should be flexible, so make sure we can retrive a non-numeric ID """ - self.client.login(username='test', password='BJOKL5kAj6aFZ6A5') - response = self.client.get('/experiments/config/303TUAAXX/json') + response = self.client.get('/experiments/config/303TUAAXX/json', apidata) self.failUnlessEqual(response.status_code, 200) flowcell = json.loads(response.content) self.failUnlessEqual(flowcell['lane_set']['3']['library_id'], 'SL039') - response = self.client.get('/samples/library/SL039/json') + response = self.client.get('/samples/library/SL039/json', apidata) self.failUnlessEqual(response.status_code, 200) library_sl039 = json.loads(response.content) self.failUnlessEqual(library_sl039['library_id'], 'SL039') + +#class RetriveConfigTestCases(TestCase): +# fixtures = ['test_flowcells.json']