X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Ffrontend%2Fsamples%2Ffixtures%2Finitial_data.json;h=72cbaf855db13b09b7b28fb3dbe16e2adb3ab7e5;hp=008867e0ce7e0c33050203a91affb4eba91a0d16;hb=bc27b813d0cdd3513323434405ee2ec5126490e5;hpb=0123277f86af843d47170d56d217f45e7d7cb4a6 diff --git a/htsworkflow/frontend/samples/fixtures/initial_data.json b/htsworkflow/frontend/samples/fixtures/initial_data.json index 008867e..72cbaf8 100644 --- a/htsworkflow/frontend/samples/fixtures/initial_data.json +++ b/htsworkflow/frontend/samples/fixtures/initial_data.json @@ -4,7 +4,7 @@ "pk": 1, "fields": { "cellline_name": "Unknown", - "notes": "Unknown" + "notes": "Unknown" } }, { @@ -12,7 +12,7 @@ "pk": 2, "fields": { "cellline_name": "C2C12 Exponential", - "notes": "" + "notes": "" } }, { @@ -20,21 +20,34 @@ "pk": 3, "fields": { "cellline_name": "C2C12 60 hrs", - "notes": "Unknown" + "notes": "Unknown" } }, { "model": "samples.LibraryType", "pk": 1, "fields": { - "name": "Single End" + "name": "Single End", + "can_multiplex": false, + "is_paired_end": false } }, { "model": "samples.LibraryType", "pk": 2, "fields": { - "name": "Paired End" + "name": "Paired End", + "can_multiplex": false, + "is_paired_end": true + } + }, + { + "model": "samples.LibraryType", + "pk": 5, + "fields": { + "name": "Barcoded", + "can_multiplex": true, + "is_paired_end": true } }, { @@ -131,5 +144,653 @@ "fields": { "scientific_name": "Strongylocentrotus purpuratus" } + }, + { + "pk": 1, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 1, + "adapter_type": 8, + "sequence": "ATCACG" + } + }, + { + "pk": 2, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 2, + "adapter_type": 8, + "sequence": "CGATGT" + } + }, + { + "pk": 3, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 3, + "adapter_type": 8, + "sequence": "TTAGGC" + } + }, + { + "pk": 4, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 4, + "adapter_type": 8, + "sequence": "TGACCA" + } + }, + { + "pk": 5, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 5, + "adapter_type": 8, + "sequence": "ACAGTG" + } + }, + { + "pk": 6, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 6, + "adapter_type": 8, + "sequence": "GCCAAT" + } + }, + { + "pk": 7, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 7, + "adapter_type": 8, + "sequence": "CAGATC" + } + }, + { + "pk": 8, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 8, + "adapter_type": 8, + "sequence": "ACTTGA" + } + }, + { + "pk": 9, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 9, + "adapter_type": 8, + "sequence": "GATCAG" + } + }, + { + "pk": 10, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 10, + "adapter_type": 8, + "sequence": "TAGCTT" + } + }, + { + "pk": 11, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 11, + "adapter_type": 8, + "sequence": "GGCTAC" + } + }, + { + "pk": 12, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 12, + "adapter_type": 8, + "sequence": "CTTGTA" + } + }, + { + "pk": 13, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 1, + "adapter_type": 7, + "sequence": "ATCACG" + } + }, + { + "pk": 14, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 2, + "adapter_type": 7, + "sequence": "CGATGT" + } + }, + { + "pk": 15, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 3, + "adapter_type": 7, + "sequence": "TTAGGC" + } + }, + { + "pk": 16, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 4, + "adapter_type": 7, + "sequence": "TGACCA" + } + }, + { + "pk": 17, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 5, + "adapter_type": 7, + "sequence": "ACAGTG" + } + }, + { + "pk": 18, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 6, + "adapter_type": 7, + "sequence": "GCCAAT" + } + }, + { + "pk": 19, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 7, + "adapter_type": 7, + "sequence": "CAGATC" + } + }, + { + "pk": 20, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 8, + "adapter_type": 7, + "sequence": "ACTTGA" + } + }, + { + "pk": 21, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 9, + "adapter_type": 7, + "sequence": "GATCAG" + } + }, + { + "pk": 22, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 10, + "adapter_type": 7, + "sequence": "TAGCTT" + } + }, + { + "pk": 23, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 11, + "adapter_type": 7, + "sequence": "GGCTAC" + } + }, + { + "pk": 24, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 12, + "adapter_type": 7, + "sequence": "CTTGTA" + } + }, + { + "pk": 25, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 13, + "adapter_type": 7, + "sequence": "AGTCAA" + } + }, + { + "pk": 26, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 14, + "adapter_type": 7, + "sequence": "AGTTCC" + } + }, + { + "pk": 27, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 15, + "adapter_type": 7, + "sequence": "ATGTCA" + } + }, + { + "pk": 28, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 16, + "adapter_type": 7, + "sequence": "CCGTCC" + } + }, + { + "pk": 29, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 17, + "adapter_type": 7, + "sequence": "GTAGAG" + } + }, + { + "pk": 30, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 18, + "adapter_type": 7, + "sequence": "GTCCGC" + } + }, + { + "pk": 31, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 19, + "adapter_type": 7, + "sequence": "GTGAAA" + } + }, + { + "pk": 32, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 20, + "adapter_type": 7, + "sequence": "GTGGCC" + } + }, + { + "pk": 33, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 21, + "adapter_type": 7, + "sequence": "GTTTCG" + } + }, + { + "pk": 34, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 22, + "adapter_type": 7, + "sequence": "CGTACG" + } + }, + { + "pk": 35, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 23, + "adapter_type": 7, + "sequence": "GAGTGG" + } + }, + { + "pk": 36, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 24, + "adapter_type": 7, + "sequence": "GGTAGC" + } + }, + { + "pk": 37, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 25, + "adapter_type": 7, + "sequence": "ACTGAT" + } + }, + { + "pk": 38, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 26, + "adapter_type": 7, + "sequence": "ATGAGC" + } + }, + { + "pk": 39, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 27, + "adapter_type": 7, + "sequence": "ATTCCT" + } + }, + { + "pk": 40, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 28, + "adapter_type": 7, + "sequence": "CAAAAG" + } + }, + { + "pk": 41, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 29, + "adapter_type": 7, + "sequence": "CAACTA" + } + }, + { + "pk": 42, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 30, + "adapter_type": 7, + "sequence": "CACCGG" + } + }, + { + "pk": 43, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 31, + "adapter_type": 7, + "sequence": "CACGAT" + } + }, + { + "pk": 44, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 32, + "adapter_type": 7, + "sequence": "CACTCA" + } + }, + { + "pk": 45, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 33, + "adapter_type": 7, + "sequence": "CAGGCG" + } + }, + { + "pk": 46, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 34, + "adapter_type": 7, + "sequence": "CATGGC" + } + }, + { + "pk": 47, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 35, + "adapter_type": 7, + "sequence": "CATTTT" + } + }, + { + "pk": 48, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 36, + "adapter_type": 7, + "sequence": "CCAACA" + } + }, + { + "pk": 49, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 37, + "adapter_type": 7, + "sequence": "CGGAAT" + } + }, + { + "pk": 50, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 38, + "adapter_type": 7, + "sequence": "CTAGCT" + } + }, + { + "pk": 51, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 39, + "adapter_type": 7, + "sequence": "CTATAC" + } + }, + { + "pk": 52, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 40, + "adapter_type": 7, + "sequence": "CTCAGA" + } + }, + { + "pk": 53, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 41, + "adapter_type": 7, + "sequence": "GACGAC" + } + }, + { + "pk": 54, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 42, + "adapter_type": 7, + "sequence": "TAATCG" + } + }, + { + "pk": 55, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 43, + "adapter_type": 7, + "sequence": "TACAGC" + } + }, + { + "pk": 56, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 44, + "adapter_type": 7, + "sequence": "TATAAT" + } + }, + { + "pk": 57, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 45, + "adapter_type": 7, + "sequence": "TCATTC" + } + }, + { + "pk": 58, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 46, + "adapter_type": 7, + "sequence": "TCCCGA" + } + }, + { + "pk": 59, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 47, + "adapter_type": 7, + "sequence": "TCGAAG" + } + }, + { + "pk": 60, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 48, + "adapter_type": 7, + "sequence": "TCGGCA" + } + }, + { + "pk": 61, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 1, + "adapter_type": 5, + "sequence": "ATCACG" + } + }, + { + "pk": 62, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 2, + "adapter_type": 5, + "sequence": "CGATGT" + } + }, + { + "pk": 63, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 3, + "adapter_type": 5, + "sequence": "TTAGGC" + } + }, + { + "pk": 64, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 4, + "adapter_type": 5, + "sequence": "TGACCA" + } + }, + { + "pk": 65, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 5, + "adapter_type": 5, + "sequence": "ACAGTG" + } + }, + { + "pk": 66, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 6, + "adapter_type": 5, + "sequence": "GCCAAT" + } + }, + { + "pk": 67, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 7, + "adapter_type": 5, + "sequence": "CAGATC" + } + }, + { + "pk": 68, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 8, + "adapter_type": 5, + "sequence": "ACTTGA" + } + }, + { + "pk": 69, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 9, + "adapter_type": 5, + "sequence": "GATCAG" + } + }, + { + "pk": 70, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 10, + "adapter_type": 5, + "sequence": "TAGCTT" + } + }, + { + "pk": 71, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 11, + "adapter_type": 5, + "sequence": "GGCTAC" + } + }, + { + "pk": 72, + "model": "samples.MultiplexIndex", + "fields": { + "multiplex_id": 12, + "adapter_type": 5, + "sequence": "CTTGTA" + } } ]