X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Fpipelines%2Fbustard.py;h=f1d73eb40fec2ccbe81ccfeb4289285acc0882d5;hp=91929ec2b07caf99029c709a415e9648e81f3e55;hb=c64e8f15c52422d93bc2b5148ad2f9414e72ddff;hpb=232ff351b32f9b2648431db5c7d878a45a56b2fa

diff --git a/htsworkflow/pipelines/bustard.py b/htsworkflow/pipelines/bustard.py
index 91929ec..f1d73eb 100644
--- a/htsworkflow/pipelines/bustard.py
+++ b/htsworkflow/pipelines/bustard.py
@@ -170,7 +170,6 @@ def crosstalk_matrix_from_bustard_config(bustard_path, bustard_config_tree):
             raise RuntimeError('Expected to find MatrixElements in Bustard BaseCallParameters')
         matrix = CrosstalkMatrix(xml=matrix_elements)
 
-    print "matrix:", matrix
     return matrix
 
 class Bustard(object):
@@ -273,7 +272,6 @@ def bustard(pathname):
     b.user = groups[2]
     b.pathname = pathname
     bustard_config_filename = os.path.join(pathname, 'config.xml')
-    print bustard_config_filename
     paramfiles = glob(os.path.join(pathname, "params?.xml"))
     for paramfile in paramfiles:
         phasing = Phasing(paramfile)