X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Fsubmission%2Fdaf.py;h=f04ac8fe5328e738a012738a5d256b9307e11504;hp=09b285b095ee2a15cfabee5bc5de3d866522c4f9;hb=8096174ac7a288f0f2198c90286d5ddab8c59731;hpb=5d3908c830a1cded1b3bfde11c8293c05e997ac1 diff --git a/htsworkflow/submission/daf.py b/htsworkflow/submission/daf.py index 09b285b..f04ac8f 100644 --- a/htsworkflow/submission/daf.py +++ b/htsworkflow/submission/daf.py @@ -385,8 +385,8 @@ class UCSCSubmission(object): def create_file_attributes(self, filename, submissionView, submission_uri, submission_dir): # add file specific information LOGGER.debug("Updating file md5sum") - fileNode = RDF.Node(RDF.Uri(submission_uri + '/' + filename)) submission_pathname = os.path.join(submission_dir, filename) + fileNode = RDF.Node(RDF.Uri("file://" + submission_pathname)) self.model.add_statement( RDF.Statement(submissionView, dafTermOntology['has_file'],