X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Fsubmission%2Fgeo.py;h=85947158390f699afa8a76cd719a0b1fadf26ebf;hp=413d2c3ae5e99daa7025a6be3101edb50d96da85;hb=28242245c13a034387a0e0a000c45e814ee12945;hpb=1e0aedcf453376920153a795db4c9a9198a808c6 diff --git a/htsworkflow/submission/geo.py b/htsworkflow/submission/geo.py index 413d2c3..8594715 100644 --- a/htsworkflow/submission/geo.py +++ b/htsworkflow/submission/geo.py @@ -111,7 +111,7 @@ class GEOSubmission(Submission): context = Context({ 'submission': str(analysis_node.uri), - 'file_class': str(geoSoftNS['supplemental']) + 'file_class': str(geoSoftNS['supplemental'].uri) }) return self.execute_query(query_template, context) @@ -123,7 +123,7 @@ class GEOSubmission(Submission): context = Context({ 'submission': str(analysis_node.uri), - 'file_class': str(geoSoftNS['raw']), + 'file_class': str(geoSoftNS['raw'].uri), }) lanes = {}