X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=htsworkflow%2Fsubmission%2Ftest%2Ftest_daf.py;h=3e960265f93fac6872382dd06aff1f0117ed175b;hp=7959d1e13d9a323281885d63454790f34f85c48f;hb=refs%2Fheads%2Fpython3-django1.5;hpb=4262586d10cc0cc227390873b301b55244204c11 diff --git a/htsworkflow/submission/test/test_daf.py b/htsworkflow/submission/test/test_daf.py index 7959d1e..3e96026 100644 --- a/htsworkflow/submission/test/test_daf.py +++ b/htsworkflow/submission/test/test_daf.py @@ -1,9 +1,9 @@ from contextlib import contextmanager import os -from StringIO import StringIO +from io import StringIO import shutil import tempfile -from unittest2 import TestCase, TestSuite, defaultTestLoader +from unittest import TestCase, TestSuite, defaultTestLoader from htsworkflow.submission import daf, results from htsworkflow.util.rdfhelp import \ @@ -121,7 +121,7 @@ class TestDAF(TestCase): signal_view_node, None, None))) self.failUnlessEqual(len(statements), 6) name = model.get_target(signal_view_node, dafTermOntology['name']) - self.failUnlessEqual(fromTypedNode(name), u'Signal') + self.failUnlessEqual(fromTypedNode(name), 'Signal') def test_get_view_namespace_from_string(self): url = "http://jumpgate.caltech.edu/wiki/SubmissionLog/cursub/" @@ -162,7 +162,7 @@ def load_daf_mapper(name, extra_statements=None, ns=None, test_daf=test_daf): def dump_model(model): writer = get_serializer() turtle = writer.serialize_model_to_string(model) - print turtle + print(turtle) class TestUCSCSubmission(TestCase): @@ -335,5 +335,5 @@ def suite(): return suite if __name__ == "__main__": - from unittest2 import main + from unittest import main main(defaultTest='suite')