X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=htsworkflow.git;a=blobdiff_plain;f=setup.py;h=dc3351cf88d7e0d8a449f02220c943bb43e64d8d;hp=eb4f67639716d487d06e91ebe212f3a2ce866ef2;hb=573fb14500e40a32c03bd3734ada296da769b884;hpb=e60838ccafd9b06505be872a03a5b6d51d18c1ce

diff --git a/setup.py b/setup.py
index eb4f676..dc3351c 100644
--- a/setup.py
+++ b/setup.py
@@ -1,10 +1,42 @@
-from setuptools import setup
+from setuptools import setup, find_packages
+from version import get_git_version
 
 setup(
-  name="uashelper",
-  description="some bots and other utilities to help deal with data from an illumina sequencer",
-  author="Diane Trout",
-  author_email="diane@caltech.edu",
-  packages=["uashelper"],
-  scripts=['scripts/spoolwatcher', 'scripts/copier'],
+    name="htsworkflow",
+    version=get_git_version(),
+    description="Utilities to help manage high-through-put sequencing",
+    author="Diane Trout, Brandon King",
+    author_email="diane@caltech.edu",
+    packages=find_packages(),
+    scripts=[
+        "scripts/htsw-copier",
+        "scripts/htsw-eland2bed",
+        "scripts/htsw-elandseq",
+        "scripts/htsw-gerald2bed",
+        "scripts/htsw-get-config",
+        "scripts/htsw-qseq2fastq",
+        "scripts/htsw-record-runfolder",
+        "scripts/htsw-runfolder",
+        "scripts/htsw-runner",
+        "scripts/htsw-spoolwatcher",
+        "scripts/htsw-srf",
+        "scripts/htsw-srf2fastq",
+        "scripts/htsw-update-archive",
+        "scripts/htsw-validate",
+    ],
+    # I should be using one or the other package import
+    package_data = {
+        '': ['*.turtle']
+        },
+    include_package_data=True,
+    install_requires=['distribute',
+                      'django >=1.1, <1.4',
+                      'lxml >= 2.2.4',
+                      'numpy >= 1.3',
+                      'benderjab >= 0.2',
+                      'httplib2',
+                      'keyring',
+                      # This dependency is redland librdf, which doesn't have a public egg
+                      #'librdf >= 1.0.14',
+    ],
 )