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(parent: 4ceb746) | patch
Added auxillliary programs needed to run projects
authorTim Reddy Tim <treddy@hudsonalpha.org>
Tue, 19 Aug 2008 19:13:20 +0000 (19:13 +0000)
committerTim Reddy Tim <treddy@hudsonalpha.org>
Tue, 19 Aug 2008 19:13:20 +0000 (19:13 +0000)
commit07092d35edd2f9016d133a86c5315d5cc800ebc8
tree859864f9ec6b90429818fd432abb38e6829a26b7tree | snapshot
parent4ceb7460b57ccbbea504a934afd0513d11c9526bcommit | diff
Added auxillliary programs needed to run projects
39 files changed:
htswanalysis/bin/BioProspector.mac [new file with mode: 0755] blob
htswanalysis/bin/ChIPSeq_PeakCaller_ENCODE [new file with mode: 0755] blob
htswanalysis/bin/QuEST/Makefile [new file with mode: 0755] blob
htswanalysis/bin/QuEST/README.txt [new file with mode: 0644] blob
htswanalysis/bin/QuEST/calibrate_peak_shift [new file with mode: 0755] blob
htswanalysis/bin/QuEST/config.mk [new file with mode: 0644] blob
htswanalysis/bin/QuEST/configure.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/extras/peakcalls2bed.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/extras/rgb_colors.pm [new file with mode: 0644] blob
htswanalysis/bin/QuEST/generate_QuEST_parameters.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/generate_peak_profile [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/Makefile [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/params.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/params.h [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/seq_contig.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/seq_contig.h [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/sequence_utility_functions.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/sequence_utility_functions.h [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/utils.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/misc/utils.h [new file with mode: 0755] blob
htswanalysis/bin/QuEST/peak_caller [new file with mode: 0755] blob
htswanalysis/bin/QuEST/quick_window_scan [new file with mode: 0755] blob
htswanalysis/bin/QuEST/run_QuEST_with_param_file.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/run_calibrate_peak_shift_with_param_file.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/run_generate_profile_with_param_file.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/run_peak_caller_with_param_file.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/run_quick_window_scan_with_param_file.pl [new file with mode: 0755] blob
htswanalysis/bin/QuEST/src/Makefile [new file with mode: 0755] blob
htswanalysis/bin/QuEST/src/calibrate_peak_shift.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/src/generate_peak_profile.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/src/peak_caller.cpp [new file with mode: 0755] blob
htswanalysis/bin/QuEST/src/quick_window_scan.cpp [new file with mode: 0755] blob
htswanalysis/bin/genomebg.mac [new file with mode: 0755] blob
htswanalysis/bin/macs [new file with mode: 0755] blob
htswanalysis/reference_data/dm3_chrlist.cod [new file with mode: 0644] blob
htswanalysis/reference_data/hg18_chrlist.cod [new file with mode: 0644] blob
htswanalysis/reference_data/mm8_chrlist.cod [new file with mode: 0644] blob
htswanalysis/reference_data/mm9_chrlist.cod [new file with mode: 0644] blob
htswanalysis/scripts/ConfigureTasks.pm diff | blob | history
htsworkflow sequencing LIMS software